RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FCHO2Q0JRZ9 810 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 ARHGAP29Q52LW3 1261 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 SFMBT2Q5VUG0 894 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 IPO4Q8TEX9 1081 aaKnown RBP14.38□□□□□ -0.11
SHMT2-234ENST00000557703 IRF7Q92985 503 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 ZSWIM3Q96MP5 696 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 TRIM5Q9C035 493 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 SLC2A4RGQ9NR83 387 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHMT2-234ENST00000557703 NOCTQ9UK39 431 aaKnown RBP14.38□□□□□ -0.11
SHMT2-234ENST00000557703 NUMBLQ9Y6R0 609 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 ANAPC1Q9H1A4 1944 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 TNFRSF10AO00220 468 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 SLC9A3R1O14745 358 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-234ENST00000557703 CHADO15335 359 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 DCXO43602 365 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 TLR5O60602 858 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 CKMP06732 381 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 SRFP11831 508 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 GLULP15104 373 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 GJA1P17302 382 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 FCARP24071 287 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 GABRB2P47870 512 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 DAOAP59103 153 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 COG7P83436 770 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 CYP4F8P98187 520 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 ADIGQ0VDE8 80 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 MTA1Q13330 715 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 PDCLQ13371 301 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 TSR1Q2NL82 804 aaKnown RBP14.37□□□□□ -0.11
SHMT2-234ENST00000557703 EFHC1Q5JVL4 640 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 DENND1BQ6P3S1 775 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 PARM1Q6UWI2 310 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 ARCQ7LC44 396 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 GPRIN1Q7Z2K8 1008 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 IRF2BP2Q7Z5L9 587 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 NOP9Q86U38 636 aaKnown RBP14.37□□□□□ -0.11
SHMT2-234ENST00000557703 VPS36Q86VN1 386 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 BPIFB1Q8TDL5 484 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 DNASE1L2Q92874 299 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 FGF14Q92915 247 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 OTUB2Q96DC9 234 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 MSANTD3Q96H12 275 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 PPP1R13BQ96KQ4 1090 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 TRMT61BQ9BVS5 477 aaKnown RBP14.37□□□□□ -0.11
SHMT2-234ENST00000557703 ULBP1Q9BZM6 244 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 GMIPQ9P107 970 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 DNMT3LQ9UJW3 386 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 NAGPAQ9UK23 515 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 STRIP2Q9ULQ0 834 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 DUSP12Q9UNI6 340 aa14.37□□□□□ -0.11
SHMT2-234ENST00000557703 NUP210Q8TEM1 1887 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-234ENST00000557703 OBSL1O75147 1896 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 HEPACAM2A8MVW5 462 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 PI4K2BG5E9Z4 385 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 ABL1P00519 1130 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 CYP1A1P04798 512 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-234ENST00000557703 GZMAP12544 262 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 SP100P23497 879 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-234ENST00000557703 HNRNPH3P31942 346 aaKnown RBP14.36□□□□□ -0.11
SHMT2-234ENST00000557703 YWHAGP61981 247 aaKnown RBP eCLIP14.36□□□□□ -0.11
SHMT2-234ENST00000557703 IFRD2Q12894 506 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-234ENST00000557703 BTBD8Q5XKL5 378 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 TANGO2Q6ICL3 276 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 CC2D1AQ6P1N0 951 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-234ENST00000557703 TOGARAM2Q6ZUX3 1019 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 ERICH1Q86X53 443 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 VSTM4Q8IW00 320 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 YAF2Q8IY57 180 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 RNF139Q8WU17 664 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 EDAQ92838 391 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 USP13Q92995 863 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-234ENST00000557703 MRFAP1L1Q96HT8 127 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 VCPIP1Q96JH7 1222 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 COL25A1Q9BXS0 654 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-234ENST00000557703 NACA2Q9H009 215 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 SYNCQ9H7C4 482 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 TRPC7Q9HCX4 862 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 ACP6Q9NPH0 428 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 RRN3Q9NYV6 651 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 WDR35Q9P2L0 1181 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 TBC1D14Q9P2M4 693 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 WNT16Q9UBV4 365 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 ZNF510Q9Y2H8 683 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 MUC3AQ02505 3323 aa14.36□□□□□ -0.11
SHMT2-234ENST00000557703 A0A1W2PQH9 124 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 E2F8A0AVK6 867 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 C2orf78A6NCI8 922 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 LRRC53A6NM62 1247 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 TULP2O00295 520 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 ZNF263O14978 683 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 COCHO43405 550 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 LTFP02788 710 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 PNMA6AP0CW24 399 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-234ENST00000557703 RARGP13631 454 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 LCP1P13796 627 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 YWHAZP63104 245 aaKnown RBP14.35□□□□□ -0.11
SHMT2-234ENST00000557703 ZXDAP98168 799 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 AMPD2Q01433 879 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms