RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 MYRFLQ96LU7 910 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 RPF1Q9H9Y2 349 aaKnown RBP13.55□□□□□ -0.24
PSEN1-219ENST00000556951 FSCN3Q9NQT6 498 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 OLFML3Q9NRN5 406 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 ABI2Q9NYB9 513 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-219ENST00000556951 MAGED2Q9UNF1 606 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-219ENST00000556951 PI4KAP42356 2102 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 ENO4A6NNW6 628 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 NOL4O94818 638 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 CSH1P0DML2 217 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 CSH2P0DML3 217 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 CD59P13987 128 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
PSEN1-219ENST00000556951 MATR3P43243 847 aaKnown RBP eCLIP13.54□□□□□ -0.24
PSEN1-219ENST00000556951 CCR10P46092 362 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 SMTNP53814 917 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 SEC13P55735 322 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 KYAT1Q16773 422 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 DDR2Q16832 855 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 MAP7D1Q3KQU3 841 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 EMC10Q5UCC4 262 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 SCARA3Q6AZY7 606 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 EPM2AIP1Q7L775 607 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-219ENST00000556951 CD302Q8IX05 232 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 THEM5Q8N1Q8 247 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 ATP2A3Q93084 1043 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 EXOC4Q96A65 974 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 PKMYT1Q99640 499 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 TSG101Q99816 390 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 PI4K2AQ9BTU6 479 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 NUSAP1Q9BXS6 441 aaKnown RBP13.54□□□□□ -0.24
PSEN1-219ENST00000556951 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
PSEN1-219ENST00000556951 TBC1D7Q9P0N9 293 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 KCNG1Q9UIX4 513 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 PILRBQ9UKJ0 227 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 DSEQ9UL01 958 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 PCDHB5Q9Y5E4 795 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 COL5A1P20908 1838 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-219ENST00000556951 FBN2P35556 2912 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 ITPR3Q14573 2671 aa13.54□□□□□ -0.24
PSEN1-219ENST00000556951 CREBBPQ92793 2442 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 SGK1O00141 431 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 CBFA2T2O43439 604 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 FGFR1OPO95684 399 aaKnown RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 USP17L7P0C7H9 530 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 TCF3P15923 654 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 IFNAR2P48551 515 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 FANCCQ00597 558 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 LRRC63Q05C16 580 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 CYP4F3Q08477 520 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 HNRNPDQ14103 355 aaKnown RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 CDKAL1Q5VV42 579 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 ANKRD40Q6AI12 368 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 ARMCX6Q7L4S7 300 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 LPCAT2Q7L5N7 544 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 METTL23Q86XA0 190 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 DCP1BQ8IZD4 617 aaKnown RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 ZNF513Q8N8E2 541 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 ARL14EPQ8N8R7 260 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 IL17RCQ8NAC3 791 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 ZNF507Q8TCN5 953 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 SH3RF2Q8TEC5 729 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 SCFD1Q8WVM8 642 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 TRMT2BQ96GJ1 504 aaKnown RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 DUSP9Q99956 384 aaKnown RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 THAP9Q9H5L6 903 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 SAMSN1Q9NSI8 373 aaKnown RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 LARSQ9P2J5 1176 aaKnown RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 DERAQ9Y315 318 aa13.53□□□□□ -0.24
PSEN1-219ENST00000556951 MUC22E2RYF6 1773 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-219ENST00000556951 ADAMTS9Q9P2N4 1935 aa13.52□□□□□ -0.24
PSEN1-219ENST00000556951 A0A0A0MRY4 1105 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 C2orf78A6NCI8 922 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 B8ZZF3 427 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 ANKRD63C9JTQ0 380 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 EIF3DO15371 548 aaKnown RBP eCLIP13.52□□□□□ -0.25
PSEN1-219ENST00000556951 SERPINC1P01008 464 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 ATP1A3P13637 1013 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 ITPKAP23677 461 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 CYP2F1P24903 491 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 ITPKBP27987 946 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 CDC25BP30305 580 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 SLC6A11P48066 632 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 TAF6P49848 677 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 CSRP3P50461 194 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 PMS1P54277 932 aaKnown RBP13.52□□□□□ -0.25
PSEN1-219ENST00000556951 MRPS21P82921 87 aaKnown RBP13.52□□□□□ -0.25
PSEN1-219ENST00000556951 NR1H3Q13133 447 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 ALCAMQ13740 583 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 TMEM132DQ14C87 1099 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 BMT2Q1RMZ1 405 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 ZNF720Q7Z2F6 126 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 ADGRG2Q8IZP9 1017 aa13.52□□□□□ -0.25
PSEN1-219ENST00000556951 CSGALNACT2Q8N6G5 542 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms