RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 ARMCX6Q7L4S7 300 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 TRMT11Q7Z4G4 463 aaKnown RBP13.23□□□□□ -0.29
RDH11-207ENST00000554731 ETFBKMTQ8IXQ9 262 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 PHTF2Q8N3S3 785 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 NAT16Q8N8M0 369 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 KCNV2Q8TDN2 545 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 SMARCD1Q96GM5 515 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 NACA2Q9H009 215 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 CCSER2Q9H7U1 834 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 VRTNQ9H8Y1 702 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 ZDHHC4Q9NPG8 344 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 COMMD8Q9NX08 183 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 IL37Q9NZH6 218 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 DEC1Q9P2X7 70 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 MBD1Q9UIS9 605 aaPredicted RBP13.23□□□□□ -0.29
RDH11-207ENST00000554731 FAM208BQ5VWN6 2430 aa13.23□□□□□ -0.29
RDH11-207ENST00000554731 IGF2RP11717 2491 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 CACNA1EQ15878 2313 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 PVALEFA0A1B0GWK0 134 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 C1QTNF9BB2RNN3 333 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 TULP3O75386 442 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 AP1G2O75843 785 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 C1QTNF9P0C862 333 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 PTGER3P43115 390 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 CASP4P49662 377 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 AP3M2P53677 418 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 NCOA4Q13772 614 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 KNOP1Q1ED39 458 aaKnown RBP13.22□□□□□ -0.29
RDH11-207ENST00000554731 ANO4Q32M45 955 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 SCARA5Q6ZMJ2 495 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 PAQR9Q6ZVX9 377 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 BBS7Q8IWZ6 715 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 FRMD1Q8N878 549 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 ZNF513Q8N8E2 541 aaPredicted RBP13.22□□□□□ -0.29
RDH11-207ENST00000554731 DEFB124Q8NES8 71 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 GOLGA5Q8TBA6 731 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 DUSP9Q99956 384 aaKnown RBP13.22□□□□□ -0.29
RDH11-207ENST00000554731 BLZF1Q9H2G9 400 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 SLC39A2Q9NP94 309 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 SPHK2Q9NRA0 654 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 KRT82Q9NSB4 513 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 GMIPQ9P107 970 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 PI4KAP42356 2102 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
RDH11-207ENST00000554731 LAMA1P25391 3075 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 FAM92AA1XBS5 289 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 POLR2DO15514 142 aaKnown RBP13.21□□□□□ -0.29
RDH11-207ENST00000554731 ZBTB24O43167 697 aaPredicted RBP13.21□□□□□ -0.29
RDH11-207ENST00000554731 AP5Z1O43299 807 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 CFIP05156 583 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 ZDHHC11BP0C7U3 371 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 IRF1P10914 325 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 P4HA1P13674 534 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 ENGP17813 658 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 CASP1P29466 404 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 HOXD12P35452 270 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 MAPK8P45983 427 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 C10orf76Q5T2E6 689 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 SLC23A3Q6PIS1 610 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 ACOT1Q86TX2 421 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 TMEM25Q86YD3 366 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 TERB1Q8NA31 727 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 PARD3BQ8TEW8 1205 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 FBXO44Q9H4M3 255 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 SLC32A1Q9H598 525 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 TMEM74BQ9NUR3 256 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 PILRBQ9UKJ0 227 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 WASF3Q9UPY6 502 aa13.21□□□□□ -0.29
RDH11-207ENST00000554731 PCNX2A6NKB5 2137 aa13.21□□□□□ -0.3
RDH11-207ENST00000554731 ATXN2Q99700 1313 aaKnown RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 LRRIQ3A6PVS8 624 aaPredicted RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 K7ELQ4 463 aaPredicted RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 TLR5O60602 858 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 CCDC130P13994 396 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 HOXB2P14652 356 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 GABRG2P18507 467 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 SPINK2P20155 84 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 ITPKAP23677 461 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 NTSR1P30989 418 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 AFMP43652 599 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 ATXN3P54252 364 aaPredicted RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 CLDN10P78369 228 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 RPL6Q02878 288 aaKnown RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 PEAR1Q5VY43 1037 aaPredicted RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 GRAMD4Q6IC98 578 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 SLC36A4Q6YBV0 504 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 RABEPKQ7Z6M1 372 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 KDF1Q8NAX2 398 aaPredicted RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 CEP76Q8TAP6 659 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 WBP2Q969T9 261 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 SMOQ99835 787 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 TLR8Q9NR97 1041 aaKnown RBP13.2□□□□□ -0.3
RDH11-207ENST00000554731 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
RDH11-207ENST00000554731 TMEM8BA6NDV4 472 aa13.19□□□□□ -0.3
RDH11-207ENST00000554731 VNN1O95497 513 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms