RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 PHACTR2O75167 634 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 TULP3O75386 442 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 TOP3BO95985 862 aaKnown RBP25.68■■□□□ 1.7
FOXA1-204ENST00000554607 MYL6P60660 151 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 STK38Q15208 465 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 CNNM4Q6P4Q7 775 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 HDDC3Q8N4P3 179 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 NAT16Q8N8M0 369 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 GATA6Q92908 595 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 TNIP3Q96KP6 325 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 KCNK16Q96T55 309 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 MED10Q9BTT4 135 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 ZDHHC4Q9NPG8 344 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 SPHK2Q9NRA0 654 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 IL37Q9NZH6 218 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 CGNQ9P2M7 1197 aaKnown RBP25.68■■□□□ 1.7
FOXA1-204ENST00000554607 NEUROG3Q9Y4Z2 214 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 CFIP05156 583 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 ITPKAP23677 461 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 RDXP35241 583 aaKnown RBP25.67■■□□□ 1.7
FOXA1-204ENST00000554607 NASPP49321 788 aaPredicted RBP25.67■■□□□ 1.7
FOXA1-204ENST00000554607 SEMA3BQ13214 749 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 E2F4Q16254 413 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 ANO4Q32M45 955 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 IQUBQ8NA54 791 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 SCAMP5Q8TAC9 235 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 ZNF516Q92618 1163 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 NACA2Q9H009 215 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 XYLT2Q9H1B5 865 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 DMAP1Q9NPF5 467 aaPredicted RBP25.67■■□□□ 1.7
FOXA1-204ENST00000554607 PCNX2A6NKB5 2137 aa25.67■■□□□ 1.7
FOXA1-204ENST00000554607 TNRC6BQ9UPQ9 1833 aaKnown RBP25.67■■□□□ 1.7
FOXA1-204ENST00000554607 SLC5A3P53794 718 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 RPL6Q02878 288 aaKnown RBP25.66■■□□□ 1.7
FOXA1-204ENST00000554607 GFPT1Q06210 699 aaPredicted RBP25.66■■□□□ 1.7
FOXA1-204ENST00000554607 C10orf76Q5T2E6 689 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 FAM35AQ86V20 835 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 BBS7Q8IWZ6 715 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 TERB1Q8NA31 727 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 SMARCD1Q96GM5 515 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 CCSER2Q9H7U1 834 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 VRTNQ9H8Y1 702 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 STARD13Q9Y3M8 1113 aa25.66■■□□□ 1.7
FOXA1-204ENST00000554607 ZNF217O75362 1048 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 SERPINF2P08697 491 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 ZDHHC11BP0C7U3 371 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 HOXB2P14652 356 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 NTSR1P30989 418 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 AP3M2P53677 418 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 SDE2Q6IQ49 451 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 PIP4P1Q86T03 277 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 TMEM25Q86YD3 366 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 NELFCDQ8IXH7 590 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 C12orf56Q8IXR9 622 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 LINC00301Q8NCQ3 95 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 SCFD1Q8WVM8 642 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 DHX58Q96C10 678 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 C7orf25Q9BPX7 421 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 MTMR6Q9Y217 621 aa25.65■■□□□ 1.7
FOXA1-204ENST00000554607 ATXN2Q99700 1313 aaKnown RBP25.64■■□□□ 1.7
FOXA1-204ENST00000554607 IGF2RP11717 2491 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 FAM92AA1XBS5 289 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 H0Y626 953 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 SPTLC2O15270 562 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 PPP6R2O75170 966 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 TRIM16O95361 564 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 GABRG2P18507 467 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 ZNF667Q5HYK9 610 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 UNC13DQ70J99 1090 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 INTS4Q96HW7 963 aaKnown RBP25.64■■□□□ 1.7
FOXA1-204ENST00000554607 XPO6Q96QU8 1125 aaKnown RBP25.64■■□□□ 1.7
FOXA1-204ENST00000554607 GTPBP2Q9BX10 602 aaKnown RBP25.64■■□□□ 1.7
FOXA1-204ENST00000554607 GMIPQ9P107 970 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 MSRB2Q9Y3D2 182 aa25.64■■□□□ 1.7
FOXA1-204ENST00000554607 OPHN1O60890 802 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 CLSTN1O94985 981 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 CDH8P55286 799 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 SIM1P81133 766 aaPredicted RBP25.63■■□□□ 1.69
FOXA1-204ENST00000554607 ZNF33AQ06730 810 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 BIRC3Q13489 604 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 ZNF699Q32M78 642 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 GRAMD4Q6IC98 578 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 KIAA1211LQ6NV74 962 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 PAQR9Q6ZVX9 377 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 FBXO44Q9H4M3 255 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 SMYD3Q9H7B4 428 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 MAGEF1Q9HAY2 307 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 CALCOCO1Q9P1Z2 691 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 ZZEF1O43149 2961 aa25.63■■□□□ 1.69
FOXA1-204ENST00000554607 SPAARA0A1B0GVQ0 90 aa25.62■■□□□ 1.69
FOXA1-204ENST00000554607 HYAL3O43820 417 aaPredicted RBP25.62■■□□□ 1.69
FOXA1-204ENST00000554607 EXOC3O60645 756 aa25.62■■□□□ 1.69
FOXA1-204ENST00000554607 AP1G2O75843 785 aa25.62■■□□□ 1.69
FOXA1-204ENST00000554607 IRF1P10914 325 aa25.62■■□□□ 1.69
FOXA1-204ENST00000554607 HNRNPDQ14103 355 aaKnown RBP25.62■■□□□ 1.69
FOXA1-204ENST00000554607 HTR3DQ70Z44 454 aa25.62■■□□□ 1.69
FOXA1-204ENST00000554607 ZCCHC14Q8WYQ9 949 aaKnown RBP25.62■■□□□ 1.69
FOXA1-204ENST00000554607 GZF1Q9H116 711 aaPredicted RBP25.62■■□□□ 1.69
FOXA1-204ENST00000554607 CAPN10Q9HC96 672 aa25.62■■□□□ 1.69
FOXA1-204ENST00000554607 TLR8Q9NR97 1041 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms