RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 FAM186AA6NE01 2351 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 NEDD4P46934 1319 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 FRMPD4Q14CM0 1322 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 MICAL3Q7RTP6 2002 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 A0A0D9SFI3 127 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 DVL2O14641 736 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 SLC27A2O14975 620 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 KATNA1O75449 491 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 LRG1P02750 347 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 WEE2P0C1S8 567 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 KCNA2P16389 499 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 THBS2P35442 1172 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 STAT5AP42229 794 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 KCNC1P48547 511 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 TMPRSS15P98073 1019 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 EXOSC10Q01780 885 aaKnown RBP5.5□□□□□ -1.53
ATXN3-228ENST00000554592 ADAM9Q13443 819 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 GIT2Q14161 759 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 SEC23AQ15436 765 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 RARS2Q5T160 578 aaKnown RBP5.5□□□□□ -1.53
ATXN3-228ENST00000554592 IFIT1BQ5T764 474 aaKnown RBP5.5□□□□□ -1.53
ATXN3-228ENST00000554592 LRRC55Q6ZSA7 311 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 PLPPR4Q7Z2D5 763 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 DCLK2Q8N568 766 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 C12orf76Q8N812 135 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-228ENST00000554592 KYQ8NBH2 561 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 COG1Q8WTW3 980 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 CUL5Q93034 780 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 ZBTB10Q96DT7 871 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 SPATA25Q9BR10 227 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 UBAC1Q9BSL1 405 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 BOCQ9BWV1 1114 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 TRIM8Q9BZR9 551 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 KRT23Q9C075 422 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 SMOC1Q9H4F8 434 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 AZI2Q9H6S1 392 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 HSPBP1Q9NZL4 362 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 ASH2LQ9UBL3 628 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 MAD2L2Q9UI95 211 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 DUSP12Q9UNI6 340 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 ST3GAL5Q9UNP4 418 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 APOBEC2Q9Y235 224 aaKnown RBP5.5□□□□□ -1.53
ATXN3-228ENST00000554592 LCTP09848 1927 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 MYH4Q9Y623 1939 aa5.5□□□□□ -1.53
ATXN3-228ENST00000554592 NCANO14594 1321 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PRR5-ARHGAP8B1AHC4 643 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 B8ZZF3 427 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PRRG2O14669 202 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 TGM5O43548 720 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 NOBOXO60393 691 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 MGEA5O60502 916 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 LTFP02788 710 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 SP9P0CG40 484 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 ARP10275 920 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 KLRC1P26715 233 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 ALDH7A1P49419 539 aaKnown RBP5.49□□□□□ -1.53
ATXN3-228ENST00000554592 STAT5BP51692 787 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 KPNA1P52294 538 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-228ENST00000554592 CRYBB1P53674 252 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-228ENST00000554592 ATXN1P54253 815 aaKnown RBP5.49□□□□□ -1.53
ATXN3-228ENST00000554592 EPHA5P54756 1037 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 ARHGAP8P85298 464 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 IRF9Q00978 393 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 MTMR1Q13613 665 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 RTP5Q14D33 572 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PLCB4Q15147 1175 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 NONOQ15233 471 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-228ENST00000554592 ST3GAL2Q16842 350 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 ATP13A4Q4VNC1 1196 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 FIGNQ5HY92 759 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 CPZQ66K79 652 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 USP17L6PQ6QN14 398 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 MTHFD1LQ6UB35 978 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 CCDC149Q6ZUS6 474 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 GPR149Q86SP6 731 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 ZNF589Q86UQ0 364 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-228ENST00000554592 STK32CQ86UX6 486 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 ZNF761Q86XN6 746 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PROSER1Q86XN7 944 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 SPATS2Q86XZ4 545 aaKnown RBP5.49□□□□□ -1.53
ATXN3-228ENST00000554592 C1orf210Q8IVY1 113 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 KIAA0319LQ8IZA0 1049 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 SLC39A11Q8N1S5 342 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 LRRC43Q8N309 656 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PHOSPHO1Q8TCT1 267 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 SLC22A17Q8WUG5 538 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 CASD1Q96PB1 797 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PCYT2Q99447 389 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PCDH18Q9HCL0 1135 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 JADE2Q9NQC1 790 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 DTLQ9NZJ0 730 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 KLHL42Q9P2K6 505 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 GINS2Q9Y248 185 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PCDHB4Q9Y5E5 795 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 SPTBN4Q9H254 2564 aa5.49□□□□□ -1.53
ATXN3-228ENST00000554592 PLXNA3P51805 1871 aa5.48□□□□□ -1.53
ATXN3-228ENST00000554592 SCDO00767 359 aa5.48□□□□□ -1.53
ATXN3-228ENST00000554592 MEIS2O14770 477 aa5.48□□□□□ -1.53
ATXN3-228ENST00000554592 CYTH3O43739 400 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms