RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 AP5Z1O43299 807 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 AP1G2O75843 785 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
SEC23A-206ENST00000553970 SLC6A11P48066 632 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 KDSRQ06136 332 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 SDE2Q6IQ49 451 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 ZNF513Q8N8E2 541 aaPredicted RBP18.23■□□□□ 0.51
SEC23A-206ENST00000553970 CEP76Q8TAP6 659 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 HMGB4Q8WW32 186 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 XPO6Q96QU8 1125 aaKnown RBP18.23■□□□□ 0.51
SEC23A-206ENST00000553970 KCNK16Q96T55 309 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 IMPG2Q9BZV3 1241 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 BLZF1Q9H2G9 400 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 SLC32A1Q9H598 525 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 SMYD3Q9H7B4 428 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.23■□□□□ 0.51
SEC23A-206ENST00000553970 KRT82Q9NSB4 513 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 TMEM30AQ9NV96 361 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 CEP295Q9C0D2 2601 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 USP24Q9UPU5 2620 aa18.23■□□□□ 0.51
SEC23A-206ENST00000553970 TCRBV21S2A2A0A5A6 115 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 MYL1P05976 194 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 ZDHHC11BP0C7U3 371 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 BCKDHBP21953 392 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 ZNF252P-AS1Q0IIN9 211 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 ANO4Q32M45 955 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 TRIM61Q5EBN2 209 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 SH3PXD2AQ5TCZ1 1133 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 RESP18Q5W5W9 173 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 LYSMD4Q5XG99 296 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 TADA2BQ86TJ2 420 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 ETFBKMTQ8IXQ9 262 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 TERB1Q8NA31 727 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 SCAMP5Q8TAC9 235 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 ZFRQ96KR1 1074 aaKnown RBP18.22■□□□□ 0.51
SEC23A-206ENST00000553970 CHORDC1Q9UHD1 332 aaPredicted RBP18.22■□□□□ 0.51
SEC23A-206ENST00000553970 FRMD4BQ9Y2L6 1034 aa18.22■□□□□ 0.51
SEC23A-206ENST00000553970 PLXND1Q9Y4D7 1925 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 LRRIQ3A6PVS8 624 aaPredicted RBP18.21■□□□□ 0.51
SEC23A-206ENST00000553970 IKBKBO14920 756 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 TLR5O60602 858 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 ZNF217O75362 1048 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 TULP3O75386 442 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 C4BPAP04003 597 aaKnown RBP18.21■□□□□ 0.51
SEC23A-206ENST00000553970 SLFN14P0C7P3 912 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 AFMP43652 599 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 ATXN3P54252 364 aaPredicted RBP18.21■□□□□ 0.51
SEC23A-206ENST00000553970 E2F5Q15329 346 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 GRAMD4Q6IC98 578 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 SCARA5Q6ZMJ2 495 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 C12orf40Q86WS4 652 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 FUKQ8N0W3 1084 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 CRYBG2Q8N1P7 616 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 TMC2Q8TDI7 906 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 GZF1Q9H116 711 aaPredicted RBP18.21■□□□□ 0.51
SEC23A-206ENST00000553970 CCSER2Q9H7U1 834 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 CSNK1G1Q9HCP0 422 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 PNPLA8Q9NP80 782 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 GMIPQ9P107 970 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 WDR35Q9P2L0 1181 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 USP25Q9UHP3 1055 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 STARD13Q9Y3M8 1113 aa18.21■□□□□ 0.51
SEC23A-206ENST00000553970 TMEM8BA6NDV4 472 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 PDXKO00764 312 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 SCAMP3O14828 347 aaKnown RBP18.2■□□□□ 0.5
SEC23A-206ENST00000553970 PROS1P07225 676 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 FAM200BP0CF97 657 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
SEC23A-206ENST00000553970 NTSR1P30989 418 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 ATP5C1P36542 298 aaKnown RBP18.2■□□□□ 0.5
SEC23A-206ENST00000553970 CASP4P49662 377 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 CDH8P55286 799 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 IRX4P78413 519 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 CUL4BQ13620 913 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 C10orf76Q5T2E6 689 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 SLC23A3Q6PIS1 610 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 HTR3DQ70Z44 454 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 ACOT1Q86TX2 421 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 BBS7Q8IWZ6 715 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 PHTF2Q8N3S3 785 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 SNX21Q969T3 373 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 CCDC47Q96A33 483 aaKnown RBP18.2■□□□□ 0.5
SEC23A-206ENST00000553970 DMAC2Q9NW81 257 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 PCDHA7Q9UN72 937 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 PCDHA5Q9Y5H7 936 aa18.2■□□□□ 0.5
SEC23A-206ENST00000553970 MYOFQ9NZM1 2061 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 CFAP47Q6ZTR5 3102 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 CDX4O14627 284 aaPredicted RBP18.19■□□□□ 0.5
SEC23A-206ENST00000553970 MAPK13O15264 365 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 ADAM23O75077 832 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 F13A1P00488 732 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 HOXB2P14652 356 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 RDXP35241 583 aaKnown RBP18.19■□□□□ 0.5
SEC23A-206ENST00000553970 PIK3CAP42336 1068 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 PSEN1P49768 467 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 DUOXA1Q1HG43 343 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 MAP7D1Q3KQU3 841 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 ZACNQ401N2 412 aa18.19■□□□□ 0.5
SEC23A-206ENST00000553970 KLHDC10Q6PID8 442 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms