RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 RNF38Q9H0F5 515 aa10.5□□□□□ -0.73
ACTN1-210ENST00000553779 SLC32A1Q9H598 525 aa10.5□□□□□ -0.73
ACTN1-210ENST00000553779 ZDHHC4Q9NPG8 344 aa10.5□□□□□ -0.73
ACTN1-210ENST00000553779 GMIPQ9P107 970 aa10.5□□□□□ -0.73
ACTN1-210ENST00000553779 DEC1Q9P2X7 70 aa10.5□□□□□ -0.73
ACTN1-210ENST00000553779 ATXN2Q99700 1313 aaKnown RBP10.5□□□□□ -0.73
ACTN1-210ENST00000553779 GOLGA4Q13439 2230 aaKnown RBP10.5□□□□□ -0.73
ACTN1-210ENST00000553779 ZFYVE26Q68DK2 2539 aa10.5□□□□□ -0.73
ACTN1-210ENST00000553779 PATE3B3GLJ2 98 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 SGK1O00141 431 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 AP5Z1O43299 807 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 COCHO43405 550 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 KIF20AO95235 890 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CST3P01034 146 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 FAM163BP0C2L3 166 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 HOXB2P14652 356 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CASP1P29466 404 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 HOXD13P35453 343 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 TNFRSF4P43489 277 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CASP4P49662 377 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CACNA2D1P54289 1103 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 RPL6Q02878 288 aaKnown RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 KNOP1Q1ED39 458 aaKnown RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 EPM2AIP1Q7L775 607 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 ACOT1Q86TX2 421 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 RASSF3Q86WH2 238 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 C12orf40Q86WS4 652 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 HDDC3Q8N4P3 179 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 IL17RCQ8NAC3 791 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CCDC150Q8NCX0 1101 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 SCAMP5Q8TAC9 235 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CCDC47Q96A33 483 aaKnown RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 XPO6Q96QU8 1125 aaKnown RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 GTPBP2Q9BX10 602 aaKnown RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 FBXO44Q9H4M3 255 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CCSER2Q9H7U1 834 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 TLR8Q9NR97 1041 aaKnown RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 FAM49BQ9NUQ9 324 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 DNAJC17Q9NVM6 304 aaKnown RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CHORDC1Q9UHD1 332 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-210ENST00000553779 FRMD4BQ9Y2L6 1034 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 CABIN1Q9Y6J0 2220 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 ACACAQ13085 2346 aa10.49□□□□□ -0.73
ACTN1-210ENST00000553779 LRRIQ3A6PVS8 624 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-210ENST00000553779 NEDD8-MDP1E9PL57 170 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 GIPC1O14908 333 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 TGFB1I1O43294 461 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 TLR5O60602 858 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 TULP3O75386 442 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
ACTN1-210ENST00000553779 OLFM2O95897 454 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 FAM200BP0CF97 657 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 CCDC130P13994 396 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 ADORA2BP29275 332 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 WASP42768 502 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 TUBP50607 506 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 CDH8P55286 799 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 MAP3K7CLP57077 242 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 SHC2P98077 582 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 ZXDBP98169 803 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 ORC1Q13415 861 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 CEP135Q66GS9 1140 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 RHBDF2Q6PJF5 856 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 SHC4Q6S5L8 630 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 RABEPKQ7Z6M1 372 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 SYT12Q8IV01 421 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 SFTPA1Q8IWL2 248 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 BBS7Q8IWZ6 715 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 CHPFQ8IZ52 775 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 ADGRG2Q8IZP9 1017 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 DEFB124Q8NES8 71 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 SLC2A14Q8TDB8 520 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 ERLEC1Q96DZ1 483 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 KCNK16Q96T55 309 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 BBS2Q9BXC9 721 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.73
ACTN1-210ENST00000553779 SPHK2Q9NRA0 654 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 DSPP15924 2871 aaKnown RBP10.48□□□□□ -0.73
ACTN1-210ENST00000553779 ATRXP46100 2492 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 PKD1L2Q7Z442 2459 aa10.48□□□□□ -0.73
ACTN1-210ENST00000553779 CKAP5Q14008 2032 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 PVALEFA0A1B0GWK0 134 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 TNFRSF10BO14763 440 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 NDUFS2O75306 463 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 RDXP35241 583 aaKnown RBP10.47□□□□□ -0.73
ACTN1-210ENST00000553779 P2RY2P41231 377 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 IRX4P78413 519 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 GFPT1Q06210 699 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-210ENST00000553779 CUL4BQ13620 913 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 GAB4Q2WGN9 574 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 EMC10Q5UCC4 262 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 KIAA1211LQ6NV74 962 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 CNNM4Q6P4Q7 775 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 UNQ6494/PRO21346Q6UXR6 183 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 SLC36A4Q6YBV0 504 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 TPGS1Q6ZTW0 290 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 TADA2BQ86TJ2 420 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 C12orf56Q8IXR9 622 aa10.47□□□□□ -0.73
ACTN1-210ENST00000553779 GRAMD1CQ8IYS0 662 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms