RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 USP34Q70CQ2 3546 aa17.62■□□□□ 0.41
BRF1-219ENST00000551787 MIA3Q5JRA6 1907 aa17.62■□□□□ 0.41
BRF1-219ENST00000551787 DMDP11532 3685 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 VDRP11473 427 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 RARGP13631 454 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 SLC9A1P19634 815 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 BRD2P25440 801 aaKnown RBP17.61■□□□□ 0.41
BRF1-219ENST00000551787 NBL1P41271 181 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 TUBP50607 506 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 SLC8A3P57103 927 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 LRRC32Q14392 662 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 FSTL4Q6MZW2 842 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 GJB7Q6PEY0 223 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 SCD5Q86SK9 330 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 ADGRG2Q8IZP9 1017 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 ZSWIM1Q9BR11 485 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 PNPLA8Q9NP80 782 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 C2orf42Q9NWW7 574 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 HESX1Q9UBX0 185 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 KIAA1257Q9ULG3 409 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 USP3Q9Y6I4 520 aa17.61■□□□□ 0.41
BRF1-219ENST00000551787 GOLGA6L22H0YM25 854 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 O00370 1275 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 TRDMT1O14717 391 aaKnown RBP17.6■□□□□ 0.41
BRF1-219ENST00000551787 EGFP01133 1207 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 KRT5P13647 590 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 HOXC13P31276 330 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 ATP5C1P36542 298 aaKnown RBP17.6■□□□□ 0.41
BRF1-219ENST00000551787 TKTL1P51854 596 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 AMPD2Q01433 879 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 SATB1Q01826 763 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 GCNT1Q02742 428 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 GRSF1Q12849 480 aaKnown RBP eCLIP17.6■□□□□ 0.41
BRF1-219ENST00000551787 NR1H3Q13133 447 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 CCINQ13939 588 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 TMEM196Q5HYL7 178 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 DGKKQ5KSL6 1271 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 C10orf120Q5SQS8 335 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 CCDC186Q7Z3E2 898 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 RBBP8NLQ8NC74 664 aaPredicted RBP17.6■□□□□ 0.41
BRF1-219ENST00000551787 P2RY13Q9BPV8 354 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 THAP9Q9H5L6 903 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.6■□□□□ 0.41
BRF1-219ENST00000551787 DACH1Q9UI36 760 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 SH3BP1Q9Y3L3 701 aa17.6■□□□□ 0.41
BRF1-219ENST00000551787 KIF26AQ9ULI4 1882 aaPredicted RBP17.59■□□□□ 0.41
BRF1-219ENST00000551787 PIK3R2O00459 728 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 SLC9A3R1O14745 358 aaPredicted RBP17.59■□□□□ 0.41
BRF1-219ENST00000551787 NFATC1O95644 943 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 PAEPP09466 180 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 ERCC5P28715 1186 aaPredicted RBP17.59■□□□□ 0.41
BRF1-219ENST00000551787 RGS7P49802 495 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 DHCR24Q15392 516 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 RHBDF2Q6PJF5 856 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 DDX42Q86XP3 938 aaKnown RBP eCLIP17.59■□□□□ 0.41
BRF1-219ENST00000551787 BBS7Q8IWZ6 715 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 KLF16Q9BXK1 252 aaPredicted RBP17.59■□□□□ 0.41
BRF1-219ENST00000551787 ULBP1Q9BZM6 244 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 UBXN6Q9BZV1 441 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 CYLDQ9NQC7 956 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 POLR3BQ9NW08 1133 aaPredicted RBP17.59■□□□□ 0.41
BRF1-219ENST00000551787 FBXO4Q9UKT5 387 aa17.59■□□□□ 0.41
BRF1-219ENST00000551787 E2F8A0AVK6 867 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 XPO1O14980 1071 aaKnown RBP17.58■□□□□ 0.4
BRF1-219ENST00000551787 GFRA3O60609 400 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 CYP17A1P05093 508 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 RALAP11233 206 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 LCP1P13796 627 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 PRKCSHP14314 528 aaPredicted RBP17.58■□□□□ 0.4
BRF1-219ENST00000551787 CXCL12P48061 93 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 SLC6A11P48066 632 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 ZNF132P52740 706 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 BCAT1P54687 386 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 ADIGQ0VDE8 80 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 BST2Q10589 180 aaKnown RBP17.58■□□□□ 0.4
BRF1-219ENST00000551787 ARHGAP44Q17R89 818 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 RAB41Q5JT25 222 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 PKN3Q6P5Z2 889 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 TRIM65Q6PJ69 517 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 LCLAT1Q6UWP7 414 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 GBP6Q6ZN66 633 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 ASCL5Q7RTU5 278 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 MIB1Q86YT6 1006 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 CD101Q93033 1021 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 NKD2Q969F2 451 aaPredicted RBP17.58■□□□□ 0.4
BRF1-219ENST00000551787 LRRC4Q9HBW1 653 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 ACP6Q9NPH0 428 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 SAMSN1Q9NSI8 373 aaKnown RBP17.58■□□□□ 0.4
BRF1-219ENST00000551787 DNMT3LQ9UJW3 386 aa17.58■□□□□ 0.4
BRF1-219ENST00000551787 WDR87Q6ZQQ6 2873 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 PROB1E7EW31 1015 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 M0QYV0 167 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 GABBR2O75899 941 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 ZBED1O96006 694 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 PON1P27169 355 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 USP8P40818 1118 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 YWHAGP61981 247 aaKnown RBP eCLIP17.57■□□□□ 0.4
BRF1-219ENST00000551787 EFEMP1Q12805 493 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 CNGA2Q16280 664 aa17.57■□□□□ 0.4
BRF1-219ENST00000551787 EXOC3L4Q17RC7 722 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms