RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TBC1D5Q92609 795 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 RGMAQ96B86 450 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 SLC7A6OSQ96CW6 309 aaPredicted RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 CLPTM1LQ96KA5 538 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 PPP1R16BQ96T49 567 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 LBHD1Q9BQE6 289 aaPredicted RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 TEX13BQ9BXU2 312 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 ABHD16BQ9H3Z7 469 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 ARMT1Q9H993 441 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 BCO1Q9HAY6 547 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 TLR9Q9NR96 1032 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 CHST12Q9NRB3 414 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 TRMT13Q9NUP7 481 aaKnown RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 TMEM140Q9NV12 185 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 CYP39A1Q9NYL5 469 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 COL20A1Q9P218 1284 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 THEGQ9P2T0 379 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 SWAP70Q9UH65 585 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 EXOC6BQ9Y2D4 811 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 KCTD3Q9Y597 815 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 RBM8AQ9Y5S9 174 aaKnown RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 TPRP12270 2363 aaKnown RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 MYO5AQ9Y4I1 1855 aaKnown RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 SCN10AQ9Y5Y9 1956 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 AK9Q5TCS8 1911 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 SPEGQ15772 3267 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 A0A088AWK7 358 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 A0A0U1RQG5 324 aaPredicted RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 SH3D21A4FU49 640 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 C2orf78A6NCI8 922 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 KBTBD13C9JR72 458 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 H3BUI4 141 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 GOLIM4O00461 696 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 NRP1O14786 923 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 PMM2O15305 246 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 MGEA5O60502 916 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 EIF3JO75822 258 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 IDH1O75874 414 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 FLOT1O75955 427 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 GASTP01350 101 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 FGBP02675 491 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 JUNP05412 331 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 HLA-DOAP06340 250 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CA3P07451 260 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CYP2C9P11712 490 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 GYPEP15421 78 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 PI3P19957 117 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CRHR1P34998 444 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 NEK3P51956 506 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 MAP2K6P52564 334 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 AGFG1P52594 562 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 HK3P52790 923 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 PSMC6P62333 389 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 DEFB103AP81534 67 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 DSC2Q02487 901 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 NHLH1Q02575 133 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 ICA1Q05084 483 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 DUSP2Q05923 314 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 DLX2Q07687 328 aaPredicted RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 TCF15Q12870 199 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 G3BP1Q13283 466 aaKnown RBP eCLIP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 PPIGQ13427 754 aaKnown RBP eCLIP2.74□□□□□ -1.977e-10■□□□□ 9.9
CPSF6-207ENST00000551516 FGL2Q14314 439 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 RAB39AQ14964 217 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CNN3Q15417 329 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 MST1LQ2TV78 715 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 LEXMQ3ZCV2 418 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 LONRF3Q496Y0 759 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 KHDC1Q4VXA5 237 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 FAM26FQ5R3K3 315 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 C20orf194Q5TEA3 1177 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 AGBL4Q5VU57 503 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 LARP4Q71RC2 724 aaKnown RBP eCLIP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 MAEAQ7L5Y9 396 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 TMCO2Q7Z6W1 182 aaPredicted RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CLEC14AQ86T13 490 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 HERC6Q8IVU3 1022 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 KIAA0319LQ8IZA0 1049 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CARFQ8N187 725 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 Q8N3U1 123 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 KLHL36Q8N4N3 616 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 TXNDC5Q8NBS9 432 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 ACRBPQ8NEB7 543 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CHST13Q8NET6 341 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 OR7D4Q8NG98 312 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 OR2I1PQ8NGU4 316 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 FEZF2Q8TBJ5 459 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 NSUN6Q8TEA1 469 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 MTFMTQ96DP5 389 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CEP95Q96GE4 821 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 TMX3Q96JJ7 454 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 LCORQ96JN0 433 aaPredicted RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 FAM167AQ96KS9 214 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 YTHDC1Q96MU7 727 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 SEC62Q99442 399 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 ELAC2Q9BQ52 826 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 SPATA25Q9BR10 227 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 B3GNT5Q9BYG0 378 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 SEZ6LQ9BYH1 1024 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 OR10A2Q9H208 303 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms