RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 PKN3Q6P5Z2 889 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 DPH6Q7L8W6 267 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 CACNA2D4Q7Z3S7 1137 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 ANKMY2Q8IV38 441 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 FAM186BQ8IYM0 893 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 DCP1BQ8IZD4 617 aaKnown RBP7.32□□□□□ -1.24
CBX5-204ENST00000550411 CMTM8Q8IZV2 173 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 TAS1R2Q8TE23 839 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 GAB3Q8WWW8 586 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 LOXL4Q96JB6 756 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 TIGD1Q96MW7 591 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 TWNKQ96RR1 684 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 SLC46A2Q9BY10 475 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 ZNF518BQ9C0D4 1074 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 SMG9Q9H0W8 520 aaKnown RBP7.32□□□□□ -1.24
CBX5-204ENST00000550411 GKN1Q9NS71 199 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 IGSF5Q9NSI5 407 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 MAN1B1Q9UKM7 699 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 SLC8A2Q9UPR5 921 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 GPSM3Q9Y4H4 160 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 PCDHB9Q9Y5E1 797 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 FRYQ5TBA9 3013 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 CFAP47Q6ZTR5 3102 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 TRDMT1O14717 391 aaKnown RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 TM4SF5O14894 197 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 CALUO43852 315 aaPredicted RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 PDGFRBP09619 1106 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 CCNYL3P0C7X3 344 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 DDX6P26196 483 aaKnown RBP eCLIP7.31□□□□□ -1.24
CBX5-204ENST00000550411 ATICP31939 592 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 SCNN1AP37088 669 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 GCLMP48507 274 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 PXNP49023 591 aaPredicted RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 VAMP7P51809 220 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 AMPD2Q01433 879 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 ENPEPQ07075 957 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 GRSF1Q12849 480 aaKnown RBP eCLIP7.31□□□□□ -1.24
CBX5-204ENST00000550411 ORC1Q13415 861 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 BIRC3Q13489 604 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 MORC3Q14149 939 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 CCDC6Q16204 474 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 TMEM196Q5HYL7 178 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 N4BP2L1Q5TBK1 243 aaPredicted RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 ZNF658Q5TYW1 1059 aaPredicted RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 TRIM68Q6AZZ1 485 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 FSTL4Q6MZW2 842 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 PAQR9Q6ZVX9 377 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 KBTBD6Q86V97 674 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 CAMKK1Q8N5S9 505 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 MAB21L3Q8N8X9 362 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 B3GALNT2Q8NCR0 500 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 MYCBPAPQ8TBZ2 947 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 SEMA4DQ92854 862 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 SYAP1Q96A49 352 aaPredicted RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 TRMT2BQ96GJ1 504 aaKnown RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 PCED1BQ96HM7 432 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 FUBP3Q96I24 572 aaKnown RBP eCLIP7.31□□□□□ -1.24
CBX5-204ENST00000550411 ZC3H10Q96K80 434 aaKnown RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 MYRFLQ96LU7 910 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 GSDMAQ96QA5 445 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 SLC22A12Q96S37 553 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 DUSP9Q99956 384 aaKnown RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 FAM83CQ9BQN1 747 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 B3GNT5Q9BYG0 378 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 EBF3Q9H4W6 596 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 KIF9Q9HAQ2 790 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 HPS4Q9NQG7 708 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.31□□□□□ -1.243e-8■■■■■ 42.4
CBX5-204ENST00000550411 TDP1Q9NUW8 608 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 NXF1Q9UBU9 619 aaKnown RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 ANGPTL2Q9UKU9 493 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 CDH9Q9ULB4 789 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 CCL26Q9Y258 94 aa7.31□□□□□ -1.24
CBX5-204ENST00000550411 ANKRD11Q6UB99 2663 aaPredicted RBP7.31□□□□□ -1.24
CBX5-204ENST00000550411 GOLGA6L4A6NEF3 574 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 OTOL1A6NHN0 477 aaPredicted RBP7.3□□□□□ -1.24
CBX5-204ENST00000550411 SOBPA7XYQ1 873 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 CLDN5O00501 218 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 IKBKBO14920 756 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 DXOO77932 396 aaKnown RBP7.3□□□□□ -1.24
CBX5-204ENST00000550411 EGFP01133 1207 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 CSH1P0DML2 217 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 CSH2P0DML3 217 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 PTPN1P18031 435 aaKnown RBP7.3□□□□□ -1.24
CBX5-204ENST00000550411 DRD1P21728 446 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 BDNFP23560 247 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 PMLP29590 882 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 PSMC2P35998 433 aaKnown RBP7.3□□□□□ -1.24
CBX5-204ENST00000550411 PIK3CAP42336 1068 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 GALK1P51570 392 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 AP3M2P53677 418 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 TNNC1P63316 161 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 NOP14P78316 857 aaKnown RBP7.3□□□□□ -1.24
CBX5-204ENST00000550411 INCA1Q0VD86 236 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 TRPC3Q13507 836 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 SWI5Q1ZZU3 235 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 CBWD6Q4V339 395 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 MSS51Q4VC12 460 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 ZNF667Q5HYK9 610 aa7.3□□□□□ -1.24
CBX5-204ENST00000550411 CBWD3Q5JTY5 395 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms