RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ADCY8P40145 1251 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ALDH7A1P49419 539 aaKnown RBP14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-215ENST00000547672 CDH6P55285 790 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ARL13BQ3SXY8 428 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ATP13A4Q4VNC1 1196 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 PM20D1Q6GTS8 502 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ZNF280DQ6N043 979 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 CD300LGQ6UXG3 332 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 PDZD4Q76G19 769 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ZNF280BQ86YH2 543 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 LRRC43Q8N309 656 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ARFGAP1Q8N6T3 406 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 MYLPFQ96A32 169 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 SNF8Q96H20 258 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 CEP295NLQ96MC4 621 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 CFAP57Q96MR6 1250 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 SLC2A13Q96QE2 648 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ZNF670Q9BS34 389 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 TMEM106CQ9BVX2 250 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ZCWPW1Q9H0M4 648 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 C11orf49Q9H6J7 331 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 COMMD8Q9NX08 183 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 ASIC3Q9UHC3 531 aa14.03□□□□□ -0.16
PTCH1-215ENST00000547672 TCRBV7S2A1N4TA0A589 114 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 CFAP69A5D8W1 941 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 C3orf70A6NLC5 250 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-215ENST00000547672 APOC4-APOC2K7ER74 178 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 NRP1O14786 923 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 HCRTO43612 131 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 CST8O60676 142 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 MYCP01106 439 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-215ENST00000547672 APOC2P02655 101 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 CLTBP09497 229 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 ACTN2P35609 894 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 HSPA9P38646 679 aaKnown RBP14.02□□□□□ -0.17
PTCH1-215ENST00000547672 ARL4AP40617 200 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 MAGEA11P43364 429 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 NR2C2P49116 596 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 VCPP55072 806 aaKnown RBP14.02□□□□□ -0.17
PTCH1-215ENST00000547672 DAOAP59103 153 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 KRT17Q04695 432 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 SNX1Q13596 522 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 CDO1Q16878 200 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 DCAF6Q58WW2 860 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 KIAA0319Q5VV43 1072 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 TTC27Q6P3X3 843 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 LRIG3Q6UXM1 1119 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 ANKS3Q6ZW76 656 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 DEFB106AQ8N104 65 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 FAM71BQ8TC56 605 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 P3H4Q92791 437 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 NT5C3BQ969T7 300 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 PGAP3Q96FM1 320 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-215ENST00000547672 SMOQ99835 787 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 LPIN3Q9BQK8 851 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 C11orf84Q9BUA3 381 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-215ENST00000547672 DPH5Q9H2P9 285 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 FBXO44Q9H4M3 255 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 NRDE2Q9H7Z3 1164 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.02□□□□□ -0.17
PTCH1-215ENST00000547672 PCDHB5Q9Y5E4 795 aa14.02□□□□□ -0.17
PTCH1-215ENST00000547672 ESYT3A0FGR9 886 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 GOLGA6L10A6NI86 522 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 TBKBP1A7MCY6 615 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 APOL1O14791 398 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 MCF2LO15068 1137 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 GABBR2O75899 941 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 LTFP02788 710 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 AMHP03971 560 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 MYBL2P10244 700 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 KRT10P13645 584 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 BDNFP23560 247 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 IL1R2P27930 398 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 CYP2C18P33260 490 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 GRIK1P39086 918 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 SULT1E1P49888 294 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 EIF3BP55884 814 aaKnown RBP14.01□□□□□ -0.17
PTCH1-215ENST00000547672 FAM193AP78312 1265 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 MRPS25P82663 173 aaKnown RBP14.01□□□□□ -0.17
PTCH1-215ENST00000547672 DEUP1Q05D60 604 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 ADCY1Q08828 1119 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 GPNMBQ14956 572 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 DPYSL2Q16555 572 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 C15orf59Q2T9L4 293 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-215ENST00000547672 TRIM60Q495X7 471 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 CTXN3Q4LDR2 81 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 PAN2Q504Q3 1202 aaKnown RBP14.01□□□□□ -0.17
PTCH1-215ENST00000547672 COL13A1Q5TAT6 717 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-215ENST00000547672 DAB2IPQ5VWQ8 1189 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 NECAB2Q7Z6G3 386 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 ZDHHC14Q8IZN3 488 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 RSAD2Q8WXG1 361 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 ART4Q93070 314 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 C8orf48Q96LL4 319 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 RNF157Q96PX1 679 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 NPY6RQ99463 290 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 PKMYT1Q99640 499 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 RTP3Q9BQQ7 232 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 ULBP1Q9BZM6 244 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms