RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 WDR35Q9P2L0 1181 aa7.78□□□□□ -1.16
COPA-207ENST00000545284 MAGEC2Q9UBF1 373 aaPredicted RBP7.78□□□□□ -1.16
COPA-207ENST00000545284 HCN2Q9UL51 889 aa7.78□□□□□ -1.16
COPA-207ENST00000545284 PTPRBP23467 1997 aa7.78□□□□□ -1.16
COPA-207ENST00000545284 KNTC1P50748 2209 aa7.78□□□□□ -1.16
COPA-207ENST00000545284 KIAA1549LQ6ZVL6 1849 aa7.78□□□□□ -1.16
COPA-207ENST00000545284 COL6A6A6NMZ7 2263 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 TRIP11Q15643 1979 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 SHROOM3Q8TF72 1996 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 PTPRQQ9UMZ3 2332 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 A0A1B0GVT2 93 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 SFI1A8K8P3 1242 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 E9PMD0 336 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 LAD1O00515 517 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 TRIM66O15016 1216 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 YKT6O15498 198 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 CACNG3O60359 315 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 RFPL3O75679 317 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 IL18RAPO95256 599 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 FDPSP14324 419 aaKnown RBP7.77□□□□□ -1.17
COPA-207ENST00000545284 ANXA13P27216 316 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 CSNK1EP49674 416 aaKnown RBP7.77□□□□□ -1.17
COPA-207ENST00000545284 TPMTP51580 245 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 MYO1EQ12965 1108 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 TARDBPQ13148 414 aaKnown RBP eCLIP7.77□□□□□ -1.17
COPA-207ENST00000545284 ENPP2Q13822 863 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 KIF19Q2TAC6 998 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 SNX30Q5VWJ9 437 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 TDRD10Q5VZ19 366 aaKnown RBP7.77□□□□□ -1.17
COPA-207ENST00000545284 EGFLAMQ63HQ2 1017 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 GRAMD4Q6IC98 578 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 ERICH1Q86X53 443 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 MIB1Q86YT6 1006 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 FMNL3Q8IVF7 1028 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 SCN4BQ8IWT1 228 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 TMEM130Q8N3G9 435 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 LRRC52Q8N7C0 313 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 PDZD8Q8NEN9 1154 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 SKA1Q96BD8 255 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 C8orf48Q96LL4 319 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 RUSC1Q9BVN2 902 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 DPH1Q9BZG8 443 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 ZDHHC4Q9NPG8 344 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 MARK1Q9P0L2 795 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 GMIPQ9P107 970 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 EIF2B4Q9UI10 523 aaKnown RBP7.77□□□□□ -1.17
COPA-207ENST00000545284 DACH1Q9UI36 760 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 ODF2LQ9ULJ1 636 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 BTBD3Q9Y2F9 522 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 ANKRD6Q9Y2G4 727 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 SH3BP1Q9Y3L3 701 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 STYXL1Q9Y6J8 313 aa7.77□□□□□ -1.17
COPA-207ENST00000545284 ENC1O14682 589 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 BRINP1O60477 761 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 LDOC1O95751 146 aaPredicted RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 FAM163BP0C2L3 166 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 MBL2P11226 248 aaPredicted RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 ACADMP11310 421 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 ADSSP30520 456 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 GRIK1P39086 918 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 CTSKP43235 329 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 CDR1P51861 262 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 PCBP4P57723 403 aaKnown RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 ERVPABLB-1P60509 514 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 POSTNQ15063 836 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 ANO4Q32M45 955 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 FBXL19Q6PCT2 694 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 KIAA1324Q6UXG2 1013 aaKnown RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 TMPRSS6Q8IU80 811 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 NAT16Q8N8M0 369 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 SYT2Q8N9I0 419 aaPredicted RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 SNX29Q8TEQ0 813 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 CACTINQ8WUQ7 758 aaKnown RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 TTC9Q92623 222 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 PRCCQ92733 491 aaPredicted RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 SIPA1Q96FS4 1042 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 HIC2Q96JB3 615 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 ACOX2Q99424 681 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 LGMNQ99538 433 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.172e-6■■■■□ 21.2
COPA-207ENST00000545284 PDRG1Q9NUG6 133 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 SMPD4Q9NXE4 827 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 NXF1Q9UBU9 619 aaKnown RBP7.76□□□□□ -1.17
COPA-207ENST00000545284 CDH9Q9ULB4 789 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 L1RE1Q9UN81 338 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 SSUH2Q9Y2M2 353 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 SNX11Q9Y5W9 270 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 CITO14578 2027 aa7.76□□□□□ -1.17
COPA-207ENST00000545284 MYO16Q9Y6X6 1858 aa7.75□□□□□ -1.17
COPA-207ENST00000545284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.75□□□□□ -1.17
COPA-207ENST00000545284 A0A1B0GTQ1 180 aa7.75□□□□□ -1.17
COPA-207ENST00000545284 SYNCRIPO60506 623 aaKnown RBP7.75□□□□□ -1.17
COPA-207ENST00000545284 RTN3O95197 1032 aaPredicted RBP7.75□□□□□ -1.17
COPA-207ENST00000545284 CTDNEP1O95476 244 aa7.75□□□□□ -1.17
COPA-207ENST00000545284 ACO1P21399 889 aaKnown RBP7.75□□□□□ -1.17
COPA-207ENST00000545284 CD27P26842 260 aa7.75□□□□□ -1.17
COPA-207ENST00000545284 WASP42768 502 aa7.75□□□□□ -1.17
COPA-207ENST00000545284 USP46P62068 366 aa7.75□□□□□ -1.17
COPA-207ENST00000545284 ASIC1P78348 528 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms