RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 PCDHB12Q9Y5F1 795 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 V9GYY5 206 aaPredicted RBP13.89□□□□□ -0.19
CHFR-221ENST00000542714 ATG2AQ2TAZ0 1938 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 PGRMC1O00264 195 aaKnown RBP13.88□□□□□ -0.19
CHFR-221ENST00000542714 TRIM66O15016 1216 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 SART1O43290 800 aaKnown RBP13.88□□□□□ -0.19
CHFR-221ENST00000542714 ARHGEF15O94989 841 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 TRUB2O95900 331 aaKnown RBP13.88□□□□□ -0.19
CHFR-221ENST00000542714 SDC4P31431 198 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 PCK1P35558 622 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 MATKP42679 507 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 PAFAH1B1P43034 410 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 MAGEA10P43363 369 aaPredicted RBP13.88□□□□□ -0.19
CHFR-221ENST00000542714 HDAC4P56524 1084 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 USP46P62068 366 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 YWHAZP63104 245 aaKnown RBP13.88□□□□□ -0.19
CHFR-221ENST00000542714 ATP11AP98196 1134 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 ITIH3Q06033 890 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 SMARCB1Q12824 385 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 DDR2Q16832 855 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 CDO1Q16878 200 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 SYPL2Q5VXT5 272 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 BNIPLQ7Z465 357 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 POLNQ7Z5Q5 900 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 ZDHHC14Q8IZN3 488 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 KLHL23Q8NBE8 558 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 SPATA4Q8NEY3 305 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 FAM172AQ8WUF8 416 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 TSC1Q92574 1164 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 NT5C3BQ969T7 300 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 FAM149B1Q96BN6 582 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
CHFR-221ENST00000542714 NPY6RQ99463 290 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 RBM12Q9NTZ6 932 aaKnown RBP13.88□□□□□ -0.19
CHFR-221ENST00000542714 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
CHFR-221ENST00000542714 TCRBV7S2A1N4TA0A589 114 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 LINC01553A4QN01 128 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 CCDC85CA6NKD9 419 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 C3orf70A6NLC5 250 aaPredicted RBP13.87□□□□□ -0.19
CHFR-221ENST00000542714 EFCAB8A8MWE9 144 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 PI4K2BG5E9Z4 385 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 RNF8O76064 485 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 ABLIM3O94929 683 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 FGGP02679 453 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 LTFP02788 710 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 KRT1P04264 644 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 URODP06132 367 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 NOS2P35228 1153 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 PGFP49763 221 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 SULT1E1P49888 294 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 ATXN1P54253 815 aaKnown RBP13.87□□□□□ -0.19
CHFR-221ENST00000542714 DUSP4Q13115 394 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 SIX1Q15475 284 aaPredicted RBP13.87□□□□□ -0.19
CHFR-221ENST00000542714 SEL1L2Q5TEA6 688 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
CHFR-221ENST00000542714 SPRED2Q7Z698 418 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 SCD5Q86SK9 330 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 GPR65Q8IYL9 337 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 RAPGEF5Q92565 580 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 SEPT5Q99719 369 aaPredicted RBP13.87□□□□□ -0.19
CHFR-221ENST00000542714 MTIF3Q9H2K0 278 aaKnown RBP13.87□□□□□ -0.19
CHFR-221ENST00000542714 ZWILCHQ9H900 591 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 POPDC2Q9HBU9 364 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 NGRNQ9NPE2 291 aaKnown RBP13.87□□□□□ -0.19
CHFR-221ENST00000542714 AFF4Q9UHB7 1163 aaKnown RBP13.87□□□□□ -0.19
CHFR-221ENST00000542714 PCSK1NQ9UHG2 260 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 USP18Q9UMW8 372 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 NAALADL1Q9UQQ1 740 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHFR-221ENST00000542714 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 OBSL1O75147 1896 aa13.87□□□□□ -0.19
CHFR-221ENST00000542714 GRXCR1A8MXD5 290 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 ENDOD1O94919 500 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 SEC24AO95486 1093 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 RARAP10276 462 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 CTSAP10619 480 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 MYOGP15173 224 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 ATF6P18850 670 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 DNAJB2P25686 324 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 BMPR1AP36894 532 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 ARSEP51690 589 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 IFRD2Q12894 506 aaPredicted RBP13.86□□□□□ -0.19
CHFR-221ENST00000542714 RAB33AQ14088 237 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 SHHQ15465 462 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 ERCC6LQ2NKX8 1250 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 SMTNL2Q2TAL5 461 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 SLC25A52Q3SY17 297 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 MGAT5BQ3V5L5 792 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 DCAF6Q58WW2 860 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 TEX35Q5T0J7 233 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 MFSD7Q6UXD7 560 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 SLC13A5Q86YT5 568 aaPredicted RBP13.86□□□□□ -0.19
CHFR-221ENST00000542714 NUP93Q8N1F7 819 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 MMGT1Q8N4V1 131 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 GPR152Q8TDT2 470 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 GOLGA1Q92805 767 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 RPGRIP1Q96KN7 1286 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 SPATA17Q96L03 361 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms