RNA–Protein interactions for RNA: ENST00000542630.1

COPS7A-214, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-214ENST00000542630 IQUBQ8NA54 791 aa13.24□□□□□ -0.29
COPS7A-214ENST00000542630 GLIS3Q8NEA6 775 aa13.24□□□□□ -0.29
COPS7A-214ENST00000542630 XPO6Q96QU8 1125 aaKnown RBP13.24□□□□□ -0.29
COPS7A-214ENST00000542630 USP28Q96RU2 1077 aa13.24□□□□□ -0.29
COPS7A-214ENST00000542630 KCNK16Q96T55 309 aa13.24□□□□□ -0.29
COPS7A-214ENST00000542630 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
COPS7A-214ENST00000542630 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
COPS7A-214ENST00000542630 ZDHHC4Q9NPG8 344 aa13.24□□□□□ -0.29
COPS7A-214ENST00000542630 KBTBD4Q9NVX7 518 aa13.24□□□□□ -0.29
COPS7A-214ENST00000542630 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
COPS7A-214ENST00000542630 UBE4BO95155 1302 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 ATXN2Q99700 1313 aaKnown RBP13.23□□□□□ -0.29
COPS7A-214ENST00000542630 HOXC11O43248 304 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-214ENST00000542630 TGFB1I1O43294 461 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 TOP3BO95985 862 aaKnown RBP13.23□□□□□ -0.29
COPS7A-214ENST00000542630 SYPP08247 313 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 SERPINF2P08697 491 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 HOXD13P35453 343 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 AP3M2P53677 418 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 SLC5A3P53794 718 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 MYL6P60660 151 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 SIM1P81133 766 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-214ENST00000542630 ZNF33AQ06730 810 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 GOLGA8FQ08AF8 430 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 GOLGA8DPQ0D2H9 430 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 SEMA3BQ13214 749 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 BIRC3Q13489 604 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 PEAR1Q5VY43 1037 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-214ENST00000542630 KIAA1211LQ6NV74 962 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 EPM2AIP1Q7L775 607 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-214ENST00000542630 BBS7Q8IWZ6 715 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 NELFCDQ8IXH7 590 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 TERB1Q8NA31 727 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 ZCCHC14Q8WYQ9 949 aaKnown RBP13.23□□□□□ -0.29
COPS7A-214ENST00000542630 GATA6Q92908 595 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 SMARCD1Q96GM5 515 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 DUSP9Q99956 384 aaKnown RBP13.23□□□□□ -0.29
COPS7A-214ENST00000542630 FBXO44Q9H4M3 255 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 MSRB2Q9Y3D2 182 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 NME7Q9Y5B8 376 aa13.23□□□□□ -0.29
COPS7A-214ENST00000542630 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 SPTLC2O15270 562 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 HYAL3O43820 417 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-214ENST00000542630 EXOC3O60645 756 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 NDUFS2O75306 463 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 AP1G2O75843 785 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 IRF1P10914 325 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 P4HA1P13674 534 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 GABRG2P18507 467 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 ZNF699Q32M78 642 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 SYCP2LQ5T4T6 812 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 GRAMD4Q6IC98 578 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 FAM35AQ86V20 835 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 TMEM25Q86YD3 366 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 CHPFQ8IZ52 775 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 PHTF2Q8N3S3 785 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 DEFB119Q8N690 84 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 SCAMP5Q8TAC9 235 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 SCFD1Q8WVM8 642 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 DHX58Q96C10 678 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 ZFRQ96KR1 1074 aaKnown RBP13.22□□□□□ -0.29
COPS7A-214ENST00000542630 ZNF396Q96N95 335 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-214ENST00000542630 CCSER2Q9H7U1 834 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
COPS7A-214ENST00000542630 TLR8Q9NR97 1041 aaKnown RBP13.22□□□□□ -0.29
COPS7A-214ENST00000542630 TMEM30AQ9NV96 361 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 LSM7Q9UK45 103 aaKnown RBP13.22□□□□□ -0.29
COPS7A-214ENST00000542630 STARD13Q9Y3M8 1113 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 LAMA1P25391 3075 aa13.22□□□□□ -0.29
COPS7A-214ENST00000542630 SRRM3A6NNA2 597 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-214ENST00000542630 ARHGAP33O14559 1287 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 TLR5O60602 858 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 PPP6R2O75170 966 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-214ENST00000542630 GNSP15586 552 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
COPS7A-214ENST00000542630 WASP42768 502 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 NASPP49321 788 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-214ENST00000542630 CDH8P55286 799 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 CNNM4Q6P4Q7 775 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 UNC13DQ70J99 1090 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 HTR3DQ70Z44 454 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 PIP4P1Q86T03 277 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 RGL4Q8IZJ4 473 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 LINC00301Q8NCQ3 95 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 GOLGA5Q8TBA6 731 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 C7orf25Q9BPX7 421 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 BBS2Q9BXC9 721 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 TMEM121BQ9BXQ6 578 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-214ENST00000542630 XYLT2Q9H1B5 865 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 FAM124BQ9H5Z6 455 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-214ENST00000542630 VRTNQ9H8Y1 702 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 DNAJC17Q9NVM6 304 aaKnown RBP13.21□□□□□ -0.29
COPS7A-214ENST00000542630 IL37Q9NZH6 218 aa13.21□□□□□ -0.29
COPS7A-214ENST00000542630 GMIPQ9P107 970 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms