RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF143P52747 638 aaPredicted RBP12.79□□□□□ -0.36
NPC1-202ENST00000540608 CDH6P55285 790 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 CDH8P55286 799 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 YWHAZP63104 245 aaKnown RBP12.79□□□□□ -0.36
NPC1-202ENST00000540608 MXRA7P84157 204 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 LAMTOR4Q0VGL1 99 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 FAM160B1Q5W0V3 765 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 ATG16L1Q676U5 607 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 ALYREFQ86V81 257 aaKnown RBP12.79□□□□□ -0.36
NPC1-202ENST00000540608 TMPRSS6Q8IU80 811 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 ZBTB8OSQ8IWT0 167 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 PPM1NQ8N819 430 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 CCDC110Q8TBZ0 833 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 KLRG1Q96E93 195 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 CFAP36Q96G28 342 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 RAB6BQ9NRW1 208 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 ARMCX1Q9P291 453 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 B2RBV5 119 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 F8W8V4 182 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 H7C0C1 242 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 CLGNO14967 610 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 MICAL2O94851 1124 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 FARP2O94887 1054 aaPredicted RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 PROZP22891 400 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 PRKCHP24723 683 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 ATP5OP48047 213 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 CDK18Q07002 472 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 HSF5Q4G112 596 aaPredicted RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 ZNF667Q5HYK9 610 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 TSHZ1Q6ZSZ6 1077 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 CTAGE3PQ8IX95 158 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 PDCD7Q8N8D1 485 aaKnown RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 E2F7Q96AV8 911 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 ADPGKQ9BRR6 497 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 VCXQ9H320 206 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 PTPRHQ9HD43 1115 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.78□□□□□ -0.36
NPC1-202ENST00000540608 SPATS2LQ9NUQ6 558 aaKnown RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 SPDYE5A6NIY4 337 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 CXorf49A8MYA2 514 aaPredicted RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 RFPL1O75677 317 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 BST1Q10588 318 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 THOC5Q13769 683 aaKnown RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 PRKG1Q13976 671 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 MXD4Q14582 209 aaPredicted RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 MPZL3Q6UWV2 235 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 CYP4V2Q6ZWL3 525 aaPredicted RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 RNF149Q8NC42 400 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 PPFIBP2Q8ND30 876 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 DTX3LQ8TDB6 740 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 RTP4Q96DX8 246 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 RNF157Q96PX1 679 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 MKS1Q9NXB0 559 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 SIRPGQ9P1W8 387 aa12.78□□□□□ -0.36
NPC1-202ENST00000540608 ZC3H7BQ9UGR2 993 aaKnown RBP12.78□□□□□ -0.36
NPC1-202ENST00000540608 ENO4A6NNW6 628 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 FESP07332 822 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 KRT19P08727 400 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.36
NPC1-202ENST00000540608 CALRP27797 417 aaKnown RBP12.77□□□□□ -0.36
NPC1-202ENST00000540608 CCNFP41002 786 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 MRPS5P82675 430 aaKnown RBP12.77□□□□□ -0.36
NPC1-202ENST00000540608 TMPRSS15P98073 1019 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.36
NPC1-202ENST00000540608 ORC1Q13415 861 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 RCN2Q14257 317 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 C1orf228Q6PIY5 440 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 CNPY3Q9BT09 278 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 POPDC2Q9HBU9 364 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 ASB3Q9Y575 518 aa12.77□□□□□ -0.36
NPC1-202ENST00000540608 KCNN4O15554 427 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 GSTA2P09210 222 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 GPD1P21695 349 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 OSBPP22059 807 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 GPD2P43304 727 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 MAGEA6P43360 314 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 SATB1Q01826 763 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.37
NPC1-202ENST00000540608 SH3PXD2AQ5TCZ1 1133 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 CAND1Q86VP6 1230 aaKnown RBP12.77□□□□□ -0.37
NPC1-202ENST00000540608 TREML1Q86YW5 311 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 PLD5Q8N7P1 536 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 RAB3IL1Q8TBN0 382 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 UCMAQ8WVF2 138 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 MTBPQ96DY7 904 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 TMEM176AQ96HP8 235 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 TWNKQ96RR1 684 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 MECRQ9BV79 373 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 ELOVL4Q9GZR5 314 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 WWP1Q9H0M0 922 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 DLGAP2Q9P1A6 1054 aa12.77□□□□□ -0.37
NPC1-202ENST00000540608 SIX4Q9UIU6 781 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms