RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 POPDC2Q9HBU9 364 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 HSFX1Q9UBD0 423 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 MSRAQ9UJ68 235 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 CDC23Q9UJX2 597 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 ZNF638Q14966 1978 aaKnown RBP16.92■□□□□ 0.3
TRAF3-204ENST00000539721 CCDC66A2RUB6 948 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 LPXNO60711 386 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 RNF8O76064 485 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 RTN3O95197 1032 aaPredicted RBP16.92■□□□□ 0.3
TRAF3-204ENST00000539721 LTFP02788 710 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 ERVK-21P61565 698 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 TUBB2AQ13885 445 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 ACAP1Q15027 740 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 RAB30Q15771 203 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 CDO1Q16878 200 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 C15orf59Q2T9L4 293 aaPredicted RBP16.92■□□□□ 0.3
TRAF3-204ENST00000539721 BHLHA9Q7RTU4 235 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 KRT35Q92764 455 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 KLHL5Q96PQ7 755 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 DDX23Q9BUQ8 820 aaKnown RBP16.92■□□□□ 0.3
TRAF3-204ENST00000539721 TUBB2BQ9BVA1 445 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 EMILIN2Q9BXX0 1053 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 MRFAP1Q9Y605 127 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 PRRG1O14668 218 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 CAPN9O14815 690 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 GRM6O15303 877 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 ADH1AP07327 375 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 ATF6P18850 670 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 GJC1P36383 396 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 MATKP42679 507 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 PTPN9P43378 593 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 MARCKSL1P49006 195 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 TAS2R40P59535 323 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 ATP11AP98196 1134 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 RHOT1Q8IXI2 618 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 MICAL1Q8TDZ2 1067 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 GIPC2Q8TF65 315 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 SLC2A13Q96QE2 648 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 NKX2-4Q9H2Z4 354 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 NGRNQ9NPE2 291 aaKnown RBP16.91■□□□□ 0.3
TRAF3-204ENST00000539721 MAFFQ9ULX9 164 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRAF3-204ENST00000539721 PCDHA3Q9Y5H8 950 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 IRAK3Q9Y616 596 aa16.91■□□□□ 0.3
TRAF3-204ENST00000539721 SLC38A8A6NNN8 435 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 PSTPIP1O43586 416 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 LRCH4O75427 683 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 KLRC2P26717 231 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 NOS2P35228 1153 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 USP46P62068 366 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 GPM6BQ13491 265 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 MRPL43Q8N983 215 aaKnown RBP16.9■□□□□ 0.3
TRAF3-204ENST00000539721 COG1Q8WTW3 980 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 FAM172AQ8WUF8 416 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 PBKQ96KB5 322 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 CAPZA3Q96KX2 299 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 CEP295NLQ96MC4 621 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 COMMD8Q9NX08 183 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 STAP1Q9ULZ2 295 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 SCML2Q9UQR0 700 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 YIPF1Q9Y548 306 aa16.9■□□□□ 0.3
TRAF3-204ENST00000539721 C2orf71A6NGG8 1288 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 HIDE1A8MVS5 230 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 FSCN2O14926 492 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 ZNF185O15231 689 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 TGM5O43548 720 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 TCF4P15884 667 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 YWHAQP27348 245 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 BMP8BP34820 402 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 ALDH1A3P47895 512 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 SULT1E1P49888 294 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 YWHAGP61981 247 aaKnown RBP eCLIP16.89■□□□□ 0.3
TRAF3-204ENST00000539721 MTMR3Q13615 1198 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 HADHQ16836 314 aaKnown RBP16.89■□□□□ 0.3
TRAF3-204ENST00000539721 SH3PXD2AQ5TCZ1 1133 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 BSPRYQ5W0U4 402 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 TCEAL8Q8IYN2 117 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 ARFGAP1Q8N6T3 406 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 ALG3Q92685 438 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 FBXO32Q969P5 355 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 TRIM62Q9BVG3 475 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 L2HGDHQ9H9P8 463 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 CERS4Q9HA82 394 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 IL37Q9NZH6 218 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 NAALADL1Q9UQQ1 740 aa16.89■□□□□ 0.3
TRAF3-204ENST00000539721 H3BNC9 293 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 FYNP06241 537 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 NCAM1P13591 858 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 PEX5P50542 639 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 RWDD2BP57060 319 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 WHAMMP3Q1A5X7 153 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 SLC25A52Q3SY17 297 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 SYPL2Q5VXT5 272 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 BTBD8Q5XKL5 378 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 PPP2R2DQ66LE6 453 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 EDEM1Q92611 657 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 TBCBQ99426 244 aa16.89■□□□□ 0.29
TRAF3-204ENST00000539721 MAGED2Q9UNF1 606 aaPredicted RBP16.89■□□□□ 0.29
TRAF3-204ENST00000539721 CES2O00748 559 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms