RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 C10orf76Q5T2E6 689 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 GRAMD4Q6IC98 578 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 FAM173BQ6P4H8 233 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 SLC23A3Q6PIS1 610 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 TMEM92Q6UXU6 159 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 UNC13DQ70J99 1090 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 TADA2BQ86TJ2 420 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 CHPFQ8IZ52 775 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 NAT16Q8N8M0 369 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 DEFB124Q8NES8 71 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 USP28Q96RU2 1077 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 GTPBP2Q9BX10 602 aaKnown RBP9.47□□□□□ -0.89
SMAD3-203ENST00000537194 B3GNT5Q9BYG0 378 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 FGFBP2Q9BYJ0 223 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 IMPG2Q9BZV3 1241 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 KBTBD4Q9NVX7 518 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 WDR35Q9P2L0 1181 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 SUSD2Q9UGT4 822 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 CHORDC1Q9UHD1 332 aaPredicted RBP9.47□□□□□ -0.89
SMAD3-203ENST00000537194 ZMIZ1Q9ULJ6 1067 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 PCDHB9Q9Y5E1 797 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 PTPRJQ12913 1337 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 C1QTNF9BB2RNN3 333 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 CLDN5O00501 218 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 CDX4O14627 284 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 HOXC11O43248 304 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 COCHO43405 550 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 TULP3O75386 442 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 AP1G2O75843 785 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 RPN1P04843 607 aaKnown RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 C1QTNF9P0C862 333 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 IRF1P10914 325 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 HOXB2P14652 356 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 ENGP17813 658 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 ATP5C1P36542 298 aaKnown RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 KIR2DL1P43626 348 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 SLC5A3P53794 718 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 ZXDBP98169 803 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 NCOA4Q13772 614 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 STARD3Q14849 445 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 KNOP1Q1ED39 458 aaKnown RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 SGSM1Q2NKQ1 1148 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 EMC10Q5UCC4 262 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 CNNM4Q6P4Q7 775 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 FAM35AQ86V20 835 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 CEP57L1Q8IYX8 460 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 RGL4Q8IZJ4 473 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 TERB1Q8NA31 727 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 KDF1Q8NAX2 398 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 SPRYD3Q8NCJ5 442 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 LINC00301Q8NCQ3 95 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 CCDC150Q8NCX0 1101 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 HPS3Q969F9 1004 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 CCDC47Q96A33 483 aaKnown RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 DUSP9Q99956 384 aaKnown RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 C7orf25Q9BPX7 421 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 SCNM1Q9BWG6 230 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 BBS2Q9BXC9 721 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 DPEP3Q9H4B8 488 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 FAM124BQ9H5Z6 455 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 KRT82Q9NSB4 513 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 DNAJC17Q9NVM6 304 aaKnown RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 TFIP11Q9UBB9 837 aaKnown RBP9.46□□□□□ -0.9
SMAD3-203ENST00000537194 PILRBQ9UKJ0 227 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 ADAMTS9Q9P2N4 1935 aa9.46□□□□□ -0.9
SMAD3-203ENST00000537194 A0A087X0B3 334 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 PVALEFA0A1B0GWK0 134 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 UPK3BL1B0FP48 263 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 UPK3BL2E5RIL1 263 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 NEDD8-MDP1E9PL57 170 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 POLR2DO15514 142 aaKnown RBP9.45□□□□□ -0.9
SMAD3-203ENST00000537194 TLR5O60602 858 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 KIF20AO95235 890 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 YEATS4O95619 227 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 HSP90AA1P07900 732 aaKnown RBP9.45□□□□□ -0.9
SMAD3-203ENST00000537194 SERPINF2P08697 491 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 ITPKAP23677 461 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 PTGER3P43115 390 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 SIM1P81133 766 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-203ENST00000537194 ZNF33AQ06730 810 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 GAB4Q2WGN9 574 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 MAP7D1Q3KQU3 841 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 WDR45BQ5MNZ6 344 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 SCARA3Q6AZY7 606 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 SCARA5Q6ZMJ2 495 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 EPM2AIP1Q7L775 607 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-203ENST00000537194 C12orf40Q86WS4 652 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 BBS7Q8IWZ6 715 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 C12orf56Q8IXR9 622 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 UCMAQ8WVF2 138 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 ZCCHC14Q8WYQ9 949 aaKnown RBP9.45□□□□□ -0.9
SMAD3-203ENST00000537194 TAF4BQ92750 862 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 CDK5RAP1Q96SZ6 601 aaKnown RBP9.45□□□□□ -0.9
SMAD3-203ENST00000537194 KCNK16Q96T55 309 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 CCSER2Q9H7U1 834 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 VRTNQ9H8Y1 702 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 GMIPQ9P107 970 aa9.45□□□□□ -0.9
SMAD3-203ENST00000537194 MTMR6Q9Y217 621 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms