RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ERICH1Q86X53 443 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 TTC9BQ8N6N2 239 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 CDCA3Q99618 268 aaPredicted RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 MIS12Q9H081 205 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 PLEKHA4Q9H4M7 779 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 CYP4F11Q9HBI6 524 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 INTUQ9ULD6 942 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 SLC27A5Q9Y2P5 690 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 REXO2Q9Y3B8 237 aaKnown RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 FAM169AQ9Y6X4 670 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 A0A0U1RQJ8 604 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 TNFRSF10BO14763 440 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 GABBR2O75899 941 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 MAGEA1P43355 309 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 CDR1P51861 262 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 DUSP6Q16828 381 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 MGAT5BQ3V5L5 792 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 PTPN20Q4JDL3 420 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 CCDC149Q6ZUS6 474 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 MON1BQ7L1V2 547 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 ADGRD2Q7Z7M1 963 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 SCN4BQ8IWT1 228 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 MCOLN2Q8IZK6 566 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 CNPY4Q8N129 248 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 KREMEN2Q8NCW0 462 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 ATRIPQ8WXE1 791 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 PPP2R3CQ969Q6 453 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 CPXM1Q96SM3 734 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 TLE6Q9H808 572 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 LUC7LQ9NQ29 371 aaKnown RBP12.91□□□□□ -0.34
SCARB1-204ENST00000535005 COMMD8Q9NX08 183 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 IL37Q9NZH6 218 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 GUCA1BQ9UMX6 200 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 PCDHA13Q9Y5I0 950 aa12.91□□□□□ -0.34
SCARB1-204ENST00000535005 AGPSO00116 658 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 CALB1P05937 261 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 H2AFZP0C0S5 128 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 MYBL1P10243 752 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 GRIN2CQ14957 1233 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 DDR2Q16832 855 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 GLE1Q53GS7 698 aaKnown RBP12.9□□□□□ -0.34
SCARB1-204ENST00000535005 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 H2AFVQ71UI9 128 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 KIAA1328Q86T90 577 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 SCML4Q8N228 414 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 CAVIN3Q969G5 261 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 C18orf8Q96DM3 657 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 SEPT5Q99719 369 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-204ENST00000535005 PRDM12Q9H4Q4 367 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 NSUN3Q9H649 340 aaKnown RBP12.9□□□□□ -0.34
SCARB1-204ENST00000535005 ADAM22Q9P0K1 906 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 DPP7Q9UHL4 492 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 YIPF1Q9Y548 306 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 COL4A4P53420 1690 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-204ENST00000535005 ANKRD62A6NC57 917 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 PRRG1O14668 218 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 CSPG5O95196 566 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 ATP1A1P05023 1023 aaKnown RBP12.9□□□□□ -0.34
SCARB1-204ENST00000535005 ATF6P18850 670 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 ALDH1A3P47895 512 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 RGS7P49802 495 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 GALCP54803 685 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 PLD1Q13393 1074 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 KCNC3Q14003 757 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 ZNF268Q14587 947 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-204ENST00000535005 ZNF697Q5TEC3 545 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 ZDHHC17Q8IUH5 632 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 NUP93Q8N1F7 819 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 TRIM58Q8NG06 486 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 LRRC4Q9HBW1 653 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-204ENST00000535005 WDR35Q9P2L0 1181 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 STRIP2Q9ULQ0 834 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 INSL5Q9Y5Q6 135 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 USP3Q9Y6I4 520 aa12.9□□□□□ -0.34
SCARB1-204ENST00000535005 MYO9BQ13459 2157 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 FAM92AA1XBS5 289 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 E5RJQ4 531 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 PER2O15055 1255 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 PJA2O43164 708 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 FBXO21O94952 628 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 FSBPO95073 299 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 PAPLNO95428 1278 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 TMEM253P0C7T8 217 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 SPATA31D3P0C874 917 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 HOXA9P31269 272 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 SCNN1AP37088 669 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 GPR15P49685 360 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 LIN9Q5TKA1 542 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 PM20D1Q6GTS8 502 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 ELMSAN1Q6PJG2 1045 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 SPATA31D4Q6ZUB0 917 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 C11orf70Q9BRQ4 267 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 TTLL2Q9BWV7 592 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 CNGB3Q9NQW8 809 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms