RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 NNTQ13423 1086 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 PDK2Q15119 407 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 NFE2Q16621 373 aaPredicted RBP24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 SLC25A52Q3SY17 297 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 FAM171A1Q5VUB5 890 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 DEFB106AQ8N104 65 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 SCML4Q8N228 414 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 IRGQQ8WZA9 623 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 SLC2A13Q96QE2 648 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 TRIM51Q9BSJ1 452 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 POPDC2Q9HBU9 364 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 CHST7Q9NS84 486 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 TMEM30AQ9NV96 361 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 MARCH5Q9NX47 278 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 NFU1Q9UMS0 254 aa24.86■■□□□ 1.57
PTPMT1-205ENST00000534775 LTBP2Q14767 1821 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 OR6C75A6NL08 312 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 MDM4O15151 490 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 ZBED1O96006 694 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 TIMP1P01033 207 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 GALTP07902 379 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 FGFR3P22607 806 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 DRG2P55039 364 aaKnown RBP24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 HDAC4P56524 1084 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 HLTFQ14527 1009 aaKnown RBP eCLIP24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 ZNF280DQ6N043 979 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 CYP4V2Q6ZWL3 525 aaPredicted RBP24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 TTC13Q8NBP0 860 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 ATL2Q8NHH9 583 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 RHOBTB2Q9BYZ6 727 aa24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 FRMD8P1Q9BZ68 369 aaPredicted RBP24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 R3HDM2Q9Y2K5 976 aaKnown RBP24.85■■□□□ 1.57
PTPMT1-205ENST00000534775 GAS8O95995 478 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 CDR1P51861 262 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 BCAR1P56945 870 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 LMNB2Q03252 620 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 SNX1Q13596 522 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 SLC39A12Q504Y0 691 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 DUPD1Q68J44 220 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 FUT10Q6P4F1 479 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 DRICH1Q6PGQ1 229 aaPredicted RBP24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 VSIG1Q86XK7 387 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 ATG4AQ8WYN0 398 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 CAVIN3Q969G5 261 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 FUBP3Q96I24 572 aaKnown RBP eCLIP24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 VWA8A3KMH1 1905 aa24.84■■□□□ 1.57
PTPMT1-205ENST00000534775 DAPK3O43293 454 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 EFCAB14O75071 495 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 KCNJ1P48048 391 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 SULT1E1P49888 294 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 CDH6P55285 790 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 MRPL58Q14197 206 aaKnown RBP24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 KRT81Q14533 505 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 CASP8Q14790 479 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 PPP1R7Q15435 360 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 CTXN3Q4LDR2 81 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 DCAF6Q58WW2 860 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 BBS12Q6ZW61 710 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 GPRIN1Q7Z2K8 1008 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 CEP57Q86XR8 500 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 NDRG1Q92597 394 aaKnown RBP24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 TRIM62Q9BVG3 475 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 CALN1Q9BXU9 219 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 OXCT2Q9BYC2 517 aaPredicted RBP24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 RRN3Q9NYV6 651 aa24.83■■□□□ 1.57
PTPMT1-205ENST00000534775 MAP2K7O14733 419 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 KIAA0355O15063 1070 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 DGKIO75912 1065 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 ENDOD1O94919 500 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 UPP2O95045 317 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 RAB6CQ53S08 254 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 ERMARDQ5T6L9 678 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 NT5C3BQ969T7 300 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 MAK16Q9BXY0 300 aaKnown RBP24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 GPR62Q9BZJ7 368 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 RAB6CQ9H0N0 254 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 DPH5Q9H2P9 285 aa24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 PRDM5Q9NQX1 630 aaPredicted RBP24.83■■□□□ 1.56
PTPMT1-205ENST00000534775 H7C4K7 107 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 CAPN9O14815 690 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 LTFP02788 710 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 AMHP03971 560 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 USP17L7P0C7H9 530 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 ARSEP51690 589 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 ADCY2Q08462 1091 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 PM20D1Q6GTS8 502 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 SND1Q7KZF4 910 aaKnown RBP eCLIP24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 RFX6Q8HWS3 928 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 CCDC114Q96M63 670 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 NPY6RQ99463 290 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 SNRNP25Q9BV90 132 aaKnown RBP24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 ACBD3Q9H3P7 528 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 VIPAS39Q9H9C1 493 aa24.82■■□□□ 1.56
PTPMT1-205ENST00000534775 ZNF487B1APH4 448 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 LIASO43766 372 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 SASH3O75995 380 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 RAG1P15918 1043 aa24.81■■□□□ 1.56
PTPMT1-205ENST00000534775 TFE3P19532 575 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms