RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 PCDHGA12O60330 932 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 CYP11A1P05108 521 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 CXCL8P10145 99 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 CYP11B2P19099 503 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 PROZP22891 400 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 CCR10P46092 362 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 ZXDBP98169 803 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 ATP2C1P98194 919 aaPredicted RBP6.94□□□□□ -1.3
CD44-237ENST00000534082 IL9RQ01113 521 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 VAC14Q08AM6 782 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 SMARCB1Q12824 385 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 UBAP2LQ14157 1087 aaKnown RBP6.94□□□□□ -1.3
CD44-237ENST00000534082 KIF19Q2TAC6 998 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 C10orf76Q5T2E6 689 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 RNF20Q5VTR2 975 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 DCAF12L1Q5VU92 463 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 KIAA1614Q5VZ46 1190 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 EGFLAMQ63HQ2 1017 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 GALNT17Q6IS24 598 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 FBXL19Q6PCT2 694 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 ATG14Q6ZNE5 492 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 LRRTM3Q86VH5 581 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 CHPFQ8IZ52 775 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 CADM4Q8NFZ8 388 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 BRF1Q92994 677 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 MRGPRX1Q96LB2 322 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 MTMR9Q96QG7 549 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 ARHGAP9Q9BRR9 750 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 TARS2Q9BW92 718 aaKnown RBP6.94□□□□□ -1.3
CD44-237ENST00000534082 GPR174Q9BXC1 333 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 C1QTNF2Q9BXJ5 285 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 RWDD1Q9H446 243 aaPredicted RBP6.94□□□□□ -1.3
CD44-237ENST00000534082 ANO2Q9NQ90 1003 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 EIF2B4Q9UI10 523 aaKnown RBP6.94□□□□□ -1.3
CD44-237ENST00000534082 HCN2Q9UL51 889 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 UBQLN1Q9UMX0 589 aaKnown RBP6.94□□□□□ -1.3
CD44-237ENST00000534082 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.94□□□□□ -1.3
CD44-237ENST00000534082 SNX11Q9Y5W9 270 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 RAD54BQ9Y620 910 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 FBN2P35556 2912 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 C2CD3Q4AC94 2353 aa6.94□□□□□ -1.3
CD44-237ENST00000534082 TLN1Q9Y490 2541 aaKnown RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 E2F8A0AVK6 867 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 ARHGEF35A5YM69 484 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 SLC9A3R1O14745 358 aaPredicted RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 EIF5BO60841 1220 aaKnown RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 PRPF40AO75400 957 aaKnown RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 IGHDP01880 384 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 NFICP08651 508 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 SPATA31C1P0DKV0 1188 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 CDK4P11802 303 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 BMP2P12643 396 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 MYF5P13349 255 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 HDCP19113 662 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 CR2P20023 1033 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 CYP3A5P20815 502 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 CSNK1EP49674 416 aaKnown RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 ACADVLP49748 655 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 PDE6CP51160 858 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 LILRA4P59901 499 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 NFKB2Q00653 900 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 DNAJC3Q13217 504 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 SERINC3Q13530 473 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 NOLC1Q14978 699 aaKnown RBP eCLIP6.93□□□□□ -1.3
CD44-237ENST00000534082 SAFBQ15424 915 aaKnown RBP eCLIP6.93□□□□□ -1.3
CD44-237ENST00000534082 DDR2Q16832 855 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 ADCK5Q3MIX3 580 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 RHBDF2Q6PJF5 856 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 TAS1R3Q7RTX0 852 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 DHX40Q8IX18 779 aaKnown RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 ETFBKMTQ8IXQ9 262 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 TRIM22Q8IYM9 498 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 ADGRG2Q8IZP9 1017 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 THEM5Q8N1Q8 247 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 FSIP1Q8NA03 581 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 TERB1Q8NA31 727 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 LRRC15Q8TF66 581 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 SNRNP27Q8WVK2 155 aaKnown RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 KCNE4Q8WWG9 221 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 KIFAP3Q92845 792 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 IGSF8Q969P0 613 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 HIC2Q96JB3 615 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 MYRFLQ96LU7 910 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 ACOX2Q99424 681 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 KLF16Q9BXK1 252 aaPredicted RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 NCOA5Q9HCD5 579 aaKnown RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 POLD4Q9HCU8 107 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 WSB2Q9NYS7 404 aaPredicted RBP6.93□□□□□ -1.3
CD44-237ENST00000534082 FKBPLQ9UIM3 349 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 DSEQ9UL01 958 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 PCDHA12Q9UN75 941 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 SLCO1B1Q9Y6L6 691 aa6.93□□□□□ -1.3
CD44-237ENST00000534082 UTP20O75691 2785 aaKnown RBP6.92□□□□□ -1.3
CD44-237ENST00000534082 KNL1Q8NG31 2342 aa6.92□□□□□ -1.3
CD44-237ENST00000534082 TTC26A0AVF1 554 aa6.92□□□□□ -1.3
CD44-237ENST00000534082 CCDC169A6NNP5 214 aa6.92□□□□□ -1.3
CD44-237ENST00000534082 METTL12A8MUP2 240 aa6.92□□□□□ -1.3
CD44-237ENST00000534082 H0Y8X5 98 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms