RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SF3B1O75533 1304 aaKnown RBP eCLIP12.83□□□□□ -0.36
CHD7-211ENST00000532149 HACD1B0YJ81 288 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 C9IYK1 514 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 M0QZQ0 153 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 PAPSS1O43252 624 aaPredicted RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 HOXA2O43364 376 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 HRO43593 1189 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 FKTNO75072 461 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 DAB1O75553 588 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 TTC4O95801 387 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 ATP2A2P16615 1042 aaKnown RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 SSTR3P32745 418 aaPredicted RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 HTR7P34969 479 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 KCNJ1P48048 391 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 ARSEP51690 589 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 CDH6P55285 790 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 YWHAZP63104 245 aaKnown RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 SNX1Q13596 522 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 LPIN1Q14693 890 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 UAP1Q16222 522 aaPredicted RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 DPYSL2Q16555 572 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 TRIM71Q2Q1W2 868 aaKnown RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 CCDC14Q49A88 953 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 ACBD5Q5T8D3 534 aaPredicted RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 LLGL2Q6P1M3 1020 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 GLB1LQ6UWU2 654 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 AGMOQ6ZNB7 445 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 ZNF771Q7L3S4 317 aaPredicted RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 ANKS1BQ7Z6G8 1248 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 RFX6Q8HWS3 928 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 SIX6OS1Q8N1H7 587 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 GSTCDQ8NEC7 633 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 SLC2A14Q8TDB8 520 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 FAM172AQ8WUF8 416 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 NT5C3BQ969T7 300 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 FAF2Q96CS3 445 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 PGAP3Q96FM1 320 aaPredicted RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 RNF157Q96PX1 679 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 GAD1Q99259 594 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 C11orf84Q9BUA3 381 aaPredicted RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 CAPS2Q9BXY5 557 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 BRD8Q9H0E9 1235 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 ZWILCHQ9H900 591 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 POPDC2Q9HBU9 364 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 CSNK1G1Q9HCP0 422 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 DDX43Q9NXZ2 648 aaKnown RBP12.82□□□□□ -0.36
CHD7-211ENST00000532149 DNPEPQ9ULA0 475 aa12.82□□□□□ -0.36
CHD7-211ENST00000532149 KBTBD13C9JR72 458 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 APOL1O14791 398 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 PPEF2O14830 753 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 SPTLC1O15269 473 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 RIPK2O43353 540 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 SPAG6O75602 509 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 PDGFRBP09619 1106 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 NR1D1P20393 614 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 CCND3P30281 292 aaPredicted RBP12.81□□□□□ -0.36
CHD7-211ENST00000532149 CYP2C18P33260 490 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 GJC1P36383 396 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 ARL4AP40617 200 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 MLH1P40692 756 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 ITGA8P53708 1063 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 MRPS5P82675 430 aaKnown RBP12.81□□□□□ -0.36
CHD7-211ENST00000532149 TSPY1Q01534 308 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 SOX4Q06945 474 aaPredicted RBP12.81□□□□□ -0.36
CHD7-211ENST00000532149 ZNF844Q08AG5 666 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 SMARCB1Q12824 385 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 MTA1Q13330 715 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 TRADDQ15628 312 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 ARL13BQ3SXY8 428 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 KRT71Q3SY84 523 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 IZUMO3Q5VZ72 239 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 KAZNQ674X7 775 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 SLC9A4Q6AI14 798 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 C4orf50Q6ZRC1 276 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 CENPUQ71F23 418 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 SPATS2Q86XZ4 545 aaKnown RBP12.81□□□□□ -0.36
CHD7-211ENST00000532149 ECHDC2Q86YB7 292 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 SCUBE3Q8IX30 993 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 PPIL6Q8IXY8 311 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 FUKQ8N0W3 1084 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 ARFGAP1Q8N6T3 406 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 CENPTQ96BT3 561 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 RTP4Q96DX8 246 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 ADAM2Q99965 735 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 HINFPQ9BQA5 517 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 SYT15Q9BQS2 421 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 CALN1Q9BXU9 219 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 NEUROG2Q9H2A3 272 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 RYDENQ9NUL5 291 aaKnown RBP12.81□□□□□ -0.36
CHD7-211ENST00000532149 FAM49BQ9NUQ9 324 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 PAK5Q9P286 719 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
CHD7-211ENST00000532149 BCLAF3A2AJT9 711 aaKnown RBP12.8□□□□□ -0.36
CHD7-211ENST00000532149 SGK1O00141 431 aa12.8□□□□□ -0.36
CHD7-211ENST00000532149 ARVCFO00192 962 aa12.8□□□□□ -0.36
CHD7-211ENST00000532149 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
CHD7-211ENST00000532149 NCAM2O15394 837 aa12.8□□□□□ -0.36
CHD7-211ENST00000532149 RGS16O15492 202 aaPredicted RBP12.8□□□□□ -0.36
CHD7-211ENST00000532149 FGFR1P11362 822 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms