RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 MUTP22033 750 aa8.82□□□□□ -1
CD44-232ENST00000531118 WASP42768 502 aa8.82□□□□□ -1
CD44-232ENST00000531118 MATR3P43243 847 aaKnown RBP eCLIP8.82□□□□□ -1
CD44-232ENST00000531118 PDE6CP51160 858 aa8.82□□□□□ -1
CD44-232ENST00000531118 CLDN6P56747 220 aa8.82□□□□□ -1
CD44-232ENST00000531118 RPL10AP62906 217 aaKnown RBP8.82□□□□□ -1
CD44-232ENST00000531118 TSPY1Q01534 308 aa8.82□□□□□ -1
CD44-232ENST00000531118 MYO1EQ12965 1108 aa8.82□□□□□ -1
CD44-232ENST00000531118 STRN3Q13033 797 aa8.82□□□□□ -1
CD44-232ENST00000531118 LAPTM4AQ15012 233 aa8.82□□□□□ -1
CD44-232ENST00000531118 ENOX2Q16206 610 aaKnown RBP8.82□□□□□ -1
CD44-232ENST00000531118 ECM1Q16610 540 aa8.82□□□□□ -1
CD44-232ENST00000531118 CCDC142Q17RM4 750 aa8.82□□□□□ -1
CD44-232ENST00000531118 HLA-BQ31612 363 aa8.82□□□□□ -1
CD44-232ENST00000531118 C4orf48Q5BLP8 95 aa8.82□□□□□ -1
CD44-232ENST00000531118 C10orf76Q5T2E6 689 aa8.82□□□□□ -1
CD44-232ENST00000531118 EGFLAMQ63HQ2 1017 aa8.82□□□□□ -1
CD44-232ENST00000531118 WSCD1Q658N2 575 aa8.82□□□□□ -1
CD44-232ENST00000531118 JADE1Q6IE81 842 aa8.82□□□□□ -1
CD44-232ENST00000531118 IL27RAQ6UWB1 636 aa8.82□□□□□ -1
CD44-232ENST00000531118 ZPBP2Q6X784 338 aa8.82□□□□□ -1
CD44-232ENST00000531118 DBX2Q6ZNG2 339 aa8.82□□□□□ -1
CD44-232ENST00000531118 TMPRSS12Q86WS5 348 aa8.82□□□□□ -1
CD44-232ENST00000531118 MIB1Q86YT6 1006 aa8.82□□□□□ -1
CD44-232ENST00000531118 FMNL3Q8IVF7 1028 aa8.82□□□□□ -1
CD44-232ENST00000531118 KIAA1958Q8N8K9 716 aa8.82□□□□□ -1
CD44-232ENST00000531118 TERB1Q8NA31 727 aa8.82□□□□□ -1
CD44-232ENST00000531118 IPO4Q8TEX9 1081 aaKnown RBP8.82□□□□□ -1
CD44-232ENST00000531118 DNASE2BQ8WZ79 361 aa8.82□□□□□ -1
CD44-232ENST00000531118 ERLEC1Q96DZ1 483 aa8.82□□□□□ -1
CD44-232ENST00000531118 PYM1Q9BRP8 204 aaKnown RBP8.82□□□□□ -1
CD44-232ENST00000531118 CCSER1Q9C0I3 900 aa8.82□□□□□ -1
CD44-232ENST00000531118 SLC6A17Q9H1V8 727 aa8.82□□□□□ -1
CD44-232ENST00000531118 BRMS1Q9HCU9 246 aa8.82□□□□□ -1
CD44-232ENST00000531118 ABCB6Q9NP58 842 aa8.82□□□□□ -1
CD44-232ENST00000531118 HCN2Q9UL51 889 aa8.82□□□□□ -1
CD44-232ENST00000531118 NFE2L3Q9Y4A8 694 aa8.82□□□□□ -1
CD44-232ENST00000531118 NOTCH2Q04721 2471 aa8.81□□□□□ -1
CD44-232ENST00000531118 ANO9A1A5B4 782 aa8.81□□□□□ -1
CD44-232ENST00000531118 B8ZZF3 427 aa8.81□□□□□ -1
CD44-232ENST00000531118 PIRO00625 290 aa8.81□□□□□ -1
CD44-232ENST00000531118 CYB561D2O14569 222 aa8.81□□□□□ -1
CD44-232ENST00000531118 CLDN3O15551 220 aa8.81□□□□□ -1
CD44-232ENST00000531118 DTNBO60941 627 aa8.81□□□□□ -1
CD44-232ENST00000531118 NCAM1P13591 858 aa8.81□□□□□ -1
CD44-232ENST00000531118 HDCP19113 662 aa8.81□□□□□ -1
CD44-232ENST00000531118 CYP2F1P24903 491 aa8.81□□□□□ -1
CD44-232ENST00000531118 CD6P30203 668 aa8.81□□□□□ -1
CD44-232ENST00000531118 NTSR1P30989 418 aa8.81□□□□□ -1
CD44-232ENST00000531118 HNF1BP35680 557 aa8.81□□□□□ -1
CD44-232ENST00000531118 IL12RB1P42701 662 aa8.81□□□□□ -1
CD44-232ENST00000531118 GRK6P43250 576 aa8.81□□□□□ -1
CD44-232ENST00000531118 TAF6P49848 677 aa8.81□□□□□ -1
CD44-232ENST00000531118 RHDQ02161 417 aa8.81□□□□□ -1
CD44-232ENST00000531118 NFE2Q16621 373 aaPredicted RBP8.81□□□□□ -1
CD44-232ENST00000531118 PREPLQ4J6C6 727 aaPredicted RBP8.81□□□□□ -1
CD44-232ENST00000531118 RHBDF2Q6PJF5 856 aa8.81□□□□□ -1
CD44-232ENST00000531118 KIAA1324Q6UXG2 1013 aaKnown RBP8.81□□□□□ -1
CD44-232ENST00000531118 SPACA3Q8IXA5 215 aa8.81□□□□□ -1
CD44-232ENST00000531118 ETFBKMTQ8IXQ9 262 aa8.81□□□□□ -1
CD44-232ENST00000531118 CYP4X1Q8N118 509 aa8.81□□□□□ -1
CD44-232ENST00000531118 FSIP1Q8NA03 581 aa8.81□□□□□ -1
CD44-232ENST00000531118 LRRC15Q8TF66 581 aa8.81□□□□□ -1
CD44-232ENST00000531118 WBP1Q96G27 269 aa8.81□□□□□ -1
CD44-232ENST00000531118 ZNF274Q96GC6 653 aaPredicted RBP8.81□□□□□ -1
CD44-232ENST00000531118 ARID3AQ99856 593 aa8.81□□□□□ -1
CD44-232ENST00000531118 RUSC1Q9BVN2 902 aa8.81□□□□□ -1
CD44-232ENST00000531118 MIR1-1HGQ9H1L0 117 aa8.81□□□□□ -1
CD44-232ENST00000531118 GMIPQ9P107 970 aa8.81□□□□□ -1
CD44-232ENST00000531118 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
CD44-232ENST00000531118 CPQQ9Y646 472 aa8.81□□□□□ -1
CD44-232ENST00000531118 TLN1Q9Y490 2541 aaKnown RBP8.8□□□□□ -1
CD44-232ENST00000531118 A0A1B0GVT2 93 aa8.8□□□□□ -1
CD44-232ENST00000531118 TBC1D3BA6NDS4 549 aa8.8□□□□□ -1
CD44-232ENST00000531118 SLC9A3R1O14745 358 aaPredicted RBP8.8□□□□□ -1
CD44-232ENST00000531118 BCAT2O15382 392 aaPredicted RBP8.8□□□□□ -1
CD44-232ENST00000531118 HOXC11O43248 304 aaPredicted RBP8.8□□□□□ -1
CD44-232ENST00000531118 SIAH2O43255 324 aa8.8□□□□□ -1
CD44-232ENST00000531118 TULP3O75386 442 aa8.8□□□□□ -1
CD44-232ENST00000531118 OLFM2O95897 454 aa8.8□□□□□ -1
CD44-232ENST00000531118 NTRK1P04629 796 aa8.8□□□□□ -1
CD44-232ENST00000531118 ADRB2P07550 413 aa8.8□□□□□ -1
CD44-232ENST00000531118 OR52Z1P0C646 297 aa8.8□□□□□ -1
CD44-232ENST00000531118 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
CD44-232ENST00000531118 C6P13671 934 aa8.8□□□□□ -1
CD44-232ENST00000531118 PFKLP17858 780 aa8.8□□□□□ -1
CD44-232ENST00000531118 PSMA5P28066 241 aa8.8□□□□□ -1
CD44-232ENST00000531118 CCT6AP40227 531 aaKnown RBP8.8□□□□□ -1
CD44-232ENST00000531118 ABL2P42684 1182 aa8.8□□□□□ -1
CD44-232ENST00000531118 CCT8P50990 548 aa8.8□□□□□ -1
CD44-232ENST00000531118 SLC7A9P82251 487 aa8.8□□□□□ -1
CD44-232ENST00000531118 CCDC173Q0VFZ6 552 aa8.8□□□□□ -1
CD44-232ENST00000531118 PDIA5Q14554 519 aa8.8□□□□□ -1
CD44-232ENST00000531118 TMEM132DQ14C87 1099 aa8.8□□□□□ -1
CD44-232ENST00000531118 INTS6LQ5JSJ4 861 aaKnown RBP8.8□□□□□ -1
CD44-232ENST00000531118 LY6G5CQ5SRR4 150 aa8.8□□□□□ -1
CD44-232ENST00000531118 DCAF12L1Q5VU92 463 aa8.8□□□□□ -1
CD44-232ENST00000531118 TMEM161BQ8NDZ6 487 aa8.8□□□□□ -1
CD44-232ENST00000531118 ENGASEQ8NFI3 743 aa8.8□□□□□ -1
CD44-232ENST00000531118 BICD1Q96G01 975 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms