RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 TIGD7Q6NT04 549 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 FBXO11Q86XK2 927 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 FANCBQ8NB91 859 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ZCWPW1Q9H0M4 648 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TMEM168Q9H0V1 697 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TTYH1Q9H313 450 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 RMND5AQ9H871 391 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 PNPLA8Q9NP80 782 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 EMILIN3Q9NT22 766 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 RPS6KB2Q9UBS0 482 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 RSL24D1Q9UHA3 163 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 RUVBL2Q9Y230 463 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 COQ6Q9Y2Z9 468 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 G3V2T6 193 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 PLOD2O00469 737 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 PSMD3O43242 534 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TOP3BO95985 862 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 CCNA2P20248 432 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 PAICSP22234 425 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 CPT1AP50416 773 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 PTGISQ16647 500 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 CYP51A1Q16850 503 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TCEAL5Q5H9L2 206 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 RHOT1Q8IXI2 618 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 C7orf61Q8IZ16 206 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 LCORLQ8N3X6 602 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 LRRC20Q8TCA0 184 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 E2F7Q96AV8 911 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 XKR8Q9H6D3 395 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 CAB39LQ9H9S4 337 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TRPM5Q9NZQ8 1165 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 STOX2Q9P2F5 926 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 SPASTQ9UBP0 616 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 IP6K2Q9UHH9 426 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 GRID1Q9ULK0 1009 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 AKT3Q9Y243 479 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 CLIC4Q9Y696 253 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ZNF532Q9HCE3 1301 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 PPLO60437 1756 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 NWD2Q9ULI1 1742 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ADCY6O43306 1168 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ATP9BO43861 1147 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 PRMT3O60678 531 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ATG7O95352 703 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 NTSR2O95665 410 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 S100GP29377 79 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ARL4DP49703 201 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 NR1D2Q14995 579 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 NEDD8Q15843 81 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 LLGL2Q6P1M3 1020 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TTC27Q6P3X3 843 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ZNF554Q86TJ5 538 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 AKAP14Q86UN6 197 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 FAM9CQ8IZT9 166 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ELMOD1Q8N336 334 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 AMER2Q8N7J2 671 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 SNX31Q8N9S9 440 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ROPN1BQ9BZX4 212 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 MANSC1Q9H8J5 431 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ROPN1Q9HAT0 212 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 SEC31BQ9NQW1 1179 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ARHGEF38Q9NXL2 777 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TNNQ9UQP3 1299 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 EIF3LQ9Y262 564 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 PRODHO43272 600 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SPAG6O75602 509 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 PSAPP07602 524 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 TCF4P15884 667 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 RASA1P20936 1047 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 ARSEP51690 589 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CAMK1Q14012 370 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CCDC153Q494R4 210 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 ZNF667Q5HYK9 610 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 EFHC2Q5JST6 749 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CACHD1Q5VU97 1274 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SPRYD7Q5W111 196 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 DENND5AQ6IQ26 1287 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CASP12Q6UXS9 341 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 DSTYKQ6XUX3 929 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SCARA5Q6ZMJ2 495 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SMYD4Q8IYR2 804 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 ZNF564Q8TBZ8 553 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CD99L2Q8TCZ2 262 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 RIOK2Q9BVS4 552 aaKnown RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 WDR11Q9BZH6 1224 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 C11orf49Q9H6J7 331 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SLC28A3Q9HAS3 691 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CD274Q9NZQ7 290 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 FEM1BQ9UK73 627 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CYP2D7A0A087X1C5 515 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 BCLAF3A2AJT9 711 aaKnown RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 EPB42P16452 691 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SPRP35270 261 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 RGS4P49798 205 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 IRAK1P51617 712 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 PTPN21Q16825 1174 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 ZRANB3Q5FWF4 1079 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 BICRALQ6AI39 1079 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 ANKRD26P1Q6NSI1 321 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms