RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.72□□□□□ -0.05
DDX41-212ENST00000511040 CNTN6Q9UQ52 1028 aa14.72□□□□□ -0.05
DDX41-212ENST00000511040 USP3Q9Y6I4 520 aa14.72□□□□□ -0.05
DDX41-212ENST00000511040 BECN2A8MW95 431 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 SPECC1L-ADORA2AF8WAN1 911 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 MAN2B1O00754 1011 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 TLR5O60602 858 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 LETM1O95202 739 aaPredicted RBP14.71□□□□□ -0.05
DDX41-212ENST00000511040 PNMA6AP0CW24 399 aaPredicted RBP14.71□□□□□ -0.05
DDX41-212ENST00000511040 IRF1P10914 325 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 RARGP13631 454 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 CTHP32929 405 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 TKTL1P51854 596 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 ADIGQ0VDE8 80 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 RUNX3Q13761 415 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 PDGFRLQ15198 375 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 CNGA2Q16280 664 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 PKDCCQ504Y2 493 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 RAB41Q5JT25 222 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 DENND1BQ6P3S1 775 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 TXNDC11Q6PKC3 985 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 ENOSF1Q7L5Y1 443 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 CCDC186Q7Z3E2 898 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 DTWD2Q8NBA8 298 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 OSCP1Q8WVF1 389 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 WBP2Q969T9 261 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 ULBP1Q9BZM6 244 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 UBXN6Q9BZV1 441 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 LRRC4Q9HBW1 653 aa14.71□□□□□ -0.05
DDX41-212ENST00000511040 THAP12O43422 761 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 GALR2O43603 387 aaPredicted RBP14.7□□□□□ -0.06
DDX41-212ENST00000511040 GABBR2O75899 941 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 SETSIPP0DME0 302 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 LCP1P13796 627 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 TCF3P15923 654 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 KLK7P49862 253 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 TUBP50607 506 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 NCAPHQ15003 741 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 KLHL40Q2TBA0 621 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 EML3Q32P44 896 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 C10orf120Q5SQS8 335 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 DPY19L2P1Q6NXN4 242 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 SHC3Q92529 594 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 ZFRQ96KR1 1074 aaKnown RBP14.7□□□□□ -0.06
DDX41-212ENST00000511040 C8orf33Q9H7E9 229 aaPredicted RBP14.7□□□□□ -0.06
DDX41-212ENST00000511040 DLGAP2Q9P1A6 1054 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 MRPS17Q9Y2R5 130 aaKnown RBP14.7□□□□□ -0.06
DDX41-212ENST00000511040 MIA3Q5JRA6 1907 aa14.7□□□□□ -0.06
DDX41-212ENST00000511040 SYCE3A1L190 88 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 FOXN3O00409 490 aaPredicted RBP14.69□□□□□ -0.06
DDX41-212ENST00000511040 ZBED1O96006 694 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 CDK11BP21127 795 aaKnown RBP14.69□□□□□ -0.06
DDX41-212ENST00000511040 PLA2G4AP47712 749 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 COPB1P53618 953 aaKnown RBP14.69□□□□□ -0.06
DDX41-212ENST00000511040 TCF15Q12870 199 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 RAPGEF1Q13905 1077 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 PON2Q15165 354 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 NAIF1Q69YI7 327 aaPredicted RBP14.69□□□□□ -0.06
DDX41-212ENST00000511040 PMF1Q6P1K2 205 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 RALGPS2Q86X27 583 aaPredicted RBP14.69□□□□□ -0.06
DDX41-212ENST00000511040 ZNF687Q8N1G0 1237 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 SIX6OS1Q8N1H7 587 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 CPA6Q8N4T0 437 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 SLC35F5Q8WV83 523 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 ATP2A3Q93084 1043 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 FAM81BQ96LP2 452 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 NAT10Q9H0A0 1025 aaKnown RBP14.69□□□□□ -0.06
DDX41-212ENST00000511040 HSD3B7Q9H2F3 369 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 ECT2Q9H8V3 914 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 CYLDQ9NQC7 956 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 RBM12Q9NTZ6 932 aaKnown RBP14.69□□□□□ -0.06
DDX41-212ENST00000511040 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.69□□□□□ -0.06
DDX41-212ENST00000511040 SH3BP1Q9Y3L3 701 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 FHOD1Q9Y613 1164 aa14.69□□□□□ -0.06
DDX41-212ENST00000511040 F5P12259 2224 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 H0Y858 1186 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 TPM2P07951 284 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 RALAP11233 206 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 GNA15P30679 374 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 ATP5C1P36542 298 aaKnown RBP14.68□□□□□ -0.06
DDX41-212ENST00000511040 YWHAGP61981 247 aaKnown RBP eCLIP14.68□□□□□ -0.06
DDX41-212ENST00000511040 FZD5Q13467 585 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 DRAP1Q14919 205 aaPredicted RBP14.68□□□□□ -0.06
DDX41-212ENST00000511040 STILQ15468 1287 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 KLHDC7AQ5VTJ3 777 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 BHLHA9Q7RTU4 235 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 DDX42Q86XP3 938 aaKnown RBP eCLIP14.68□□□□□ -0.06
DDX41-212ENST00000511040 MIB1Q86YT6 1006 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 ZNF606Q8WXB4 792 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 KCTD13Q8WZ19 329 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 CHFRQ96EP1 664 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 NELL2Q99435 816 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 KLF16Q9BXK1 252 aaPredicted RBP14.68□□□□□ -0.06
DDX41-212ENST00000511040 LMAN1LQ9HAT1 526 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 SPATA6Q9NWH7 488 aaPredicted RBP14.68□□□□□ -0.06
DDX41-212ENST00000511040 LIMA1Q9UHB6 759 aaKnown RBP14.68□□□□□ -0.06
DDX41-212ENST00000511040 RASAL2Q9UJF2 1139 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 DNMT3LQ9UJW3 386 aa14.68□□□□□ -0.06
DDX41-212ENST00000511040 MED7O43513 233 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 HMBSP08397 361 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms