RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 FHOD3Q2V2M9 1422 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 MROH5Q6ZUA9 1318 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 TTC21BQ7Z4L5 1316 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 PBRM1Q86U86 1689 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ITSN2Q9NZM3 1697 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ARHGAP10A1A4S6 786 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 OR6C65A6NJZ3 312 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 C16orf96A6NNT2 1141 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 TMEM232C9JQI7 657 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 MYO1CO00159 1063 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 PSMD9O00233 223 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 TRDMT1O14717 391 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 GABRDO14764 452 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 MAPK13O15264 365 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 TEX28O15482 410 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 POLR2DO15514 142 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 STRNO43815 780 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ATP5BP06576 529 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 HPGDP15428 266 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 EVI2BP34910 448 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 RFC4P35249 363 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 KRT9P35527 623 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 MAGEA9P43362 315 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 RANBP1P43487 201 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 CLNS1AP54105 237 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 PMS2P54278 862 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 HADHBP55084 474 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ADAM15Q13444 863 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 SNX1Q13596 522 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 CUL4BQ13620 913 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ODF1Q14990 250 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 PTPN21Q16825 1174 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 FBXO43Q4G163 708 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 VASNQ6EMK4 673 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 C15orf52Q6ZUT6 534 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 LHFPL2Q6ZUX7 228 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 RAB11FIP2Q7L804 512 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ERMP1Q7Z2K6 904 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 STRA8Q7Z7C7 330 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 CAND1Q86VP6 1230 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 D2HGDHQ8N465 521 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 CCDC33Q8N5R6 958 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 MYCT1Q8N699 235 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 PCYOX1LQ8NBM8 494 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 SPC24Q8NBT2 197 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 C7orf57Q8NEG2 295 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 DIS3LQ8TF46 1054 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 CASP10Q92851 521 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ATP6V0A1Q93050 837 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 LENG9Q96B70 501 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 DTNBP1Q96EV8 351 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 SNF8Q96H20 258 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ZNF845Q96IR2 970 aaPredicted RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ZC3H10Q96K80 434 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 ACAP3Q96P50 834 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 NUDCD1Q96RS6 583 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 RIOK1Q9BRS2 568 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 DDX23Q9BUQ8 820 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 TTLL2Q9BWV7 592 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 AGXT2Q9BYV1 514 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 INTS2Q9H0H0 1204 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 MAN1C1Q9NR34 630 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 KCND1Q9NSA2 647 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 C1orf112Q9NSG2 853 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 L1RE1Q9UN81 338 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 SCAF8Q9UPN6 1271 aaKnown RBP4.81□□□□□ -1.64
NIPBL-206ENST00000509429 LIMCH1Q9UPQ0 1083 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 MAPRE3Q9UPY8 281 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 MRFAP1Q9Y605 127 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 AP1M2Q9Y6Q5 423 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 X6R8D5 127 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 KDM5BQ9UGL1 1544 aa4.81□□□□□ -1.64
NIPBL-206ENST00000509429 CNTLNQ9NXG0 1405 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 NSD2O96028 1365 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 MTUS2Q5JR59 1369 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 KIF14Q15058 1648 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 IQANK1A0A1B0GTG1 560 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ACOD1A6NK06 481 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 LSM1O15116 133 aaKnown RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ZEB2O60315 1214 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ENDOD1O94919 500 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 PLGP00747 810 aaPredicted RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ASGR1P07306 291 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 CBSLP0DN79 551 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 UBL4AP11441 157 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 CSF2RAP15509 400 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ALOX15P16050 662 aaPredicted RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 FPR2P25090 351 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 HOXA11P31270 313 aaPredicted RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 CYP2C19P33261 490 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 MCM4P33991 863 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 CBSP35520 551 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 GPC3P51654 580 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 SLC26A5P58743 744 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 RPP38P78345 283 aaKnown RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 PHEXP78562 749 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 CETN1Q12798 172 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms