RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 AP3M2P53677 418 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 IRX4P78413 519 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 GAD2Q05329 585 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 EOGTQ5NDL2 527 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 CYP2U1Q7Z449 544 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 TMEM25Q86YD3 366 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 BBS7Q8IWZ6 715 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 KIAA0895Q8NCT3 520 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 ZMIZ2Q8NF64 920 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 PIGKQ92643 395 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 SMARCD1Q96GM5 515 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 SMOQ99835 787 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 KRT82Q9NSB4 513 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 SH3BP1Q9Y3L3 701 aa12.05□□□□□ -0.48
SIL1-208ENST00000505945 CHD6Q8TD26 2715 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 FAM92AA1XBS5 289 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.04□□□□□ -0.48
SIL1-208ENST00000505945 CDX4O14627 284 aaPredicted RBP12.04□□□□□ -0.48
SIL1-208ENST00000505945 GIPC1O14908 333 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 MAP3K13O43283 966 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 TULP3O75386 442 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 ZDHHC11BP0C7U3 371 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 IRF1P10914 325 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 CCDC130P13994 396 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 P2RY2P41231 377 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 NOVA1P51513 510 aaKnown RBP12.04□□□□□ -0.48
SIL1-208ENST00000505945 NDST1P52848 882 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 MAP3K7CLP57077 242 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 SHC2P98077 582 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 DNM1Q05193 864 aaKnown RBP12.04□□□□□ -0.48
SIL1-208ENST00000505945 PKP1Q13835 747 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 SGSM1Q2NKQ1 1148 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 ANO4Q32M45 955 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 KMT5BQ4FZB7 885 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 HSF5Q4G112 596 aaPredicted RBP12.04□□□□□ -0.48
SIL1-208ENST00000505945 BTBD8Q5XKL5 378 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 SV2AQ7L0J3 742 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 LPCAT2Q7L5N7 544 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 SLC9A9Q8IVB4 645 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 ETFBKMTQ8IXQ9 262 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 TMEFF1Q8IYR6 380 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 CRYBG2Q8N1P7 616 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 PGBD3Q8N328 593 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 PHTF2Q8N3S3 785 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 C12orf29Q8N999 325 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 SLC2A14Q8TDB8 520 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 WHAMMQ8TF30 809 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 HMGB4Q8WW32 186 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 SNX21Q969T3 373 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 OTUB2Q96DC9 234 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 NACA2Q9H009 215 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 POLMQ9NP87 494 aaPredicted RBP12.04□□□□□ -0.48
SIL1-208ENST00000505945 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.482e-7■■■■■ 102.2
SIL1-208ENST00000505945 SPHK2Q9NRA0 654 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 FAM49BQ9NUQ9 324 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 EXOC1Q9NV70 894 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 BCCIPQ9P287 314 aaKnown RBP eCLIP12.04□□□□□ -0.48
SIL1-208ENST00000505945 DEC1Q9P2X7 70 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 HMGXB4Q9UGU5 601 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
SIL1-208ENST00000505945 TCRBV21S2A2A0A5A6 115 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 TRIM24O15164 1050 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 HOXC11O43248 304 aaPredicted RBP12.03□□□□□ -0.48
SIL1-208ENST00000505945 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
SIL1-208ENST00000505945 TLR5O60602 858 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 TBX18O95935 607 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 NR3C1P04150 777 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 RPN1P04843 607 aaKnown RBP12.03□□□□□ -0.48
SIL1-208ENST00000505945 HSP90AA1P07900 732 aaKnown RBP12.03□□□□□ -0.48
SIL1-208ENST00000505945 PDIA4P13667 645 aaKnown RBP12.03□□□□□ -0.48
SIL1-208ENST00000505945 P4HA1P13674 534 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 PTGER3P43115 390 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 TUBP50607 506 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 MAP7D1Q3KQU3 841 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 ZACNQ401N2 412 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 DAB2IPQ5VWQ8 1189 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 CEP135Q66GS9 1140 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 ATL3Q6DD88 541 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 SPOPLQ6IQ16 392 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 ARMCX6Q7L4S7 300 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 CSNK1G1Q9HCP0 422 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 TMEM9BQ9NQ34 198 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 TMEM74BQ9NUR3 256 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 COMMD8Q9NX08 183 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 MBD1Q9UIS9 605 aaPredicted RBP12.03□□□□□ -0.48
SIL1-208ENST00000505945 CFAP45Q9UL16 551 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 MYH10P35580 1976 aa12.03□□□□□ -0.48
SIL1-208ENST00000505945 A0A1B0GVL5 298 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 PDXKO00764 312 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 ASS1P00966 412 aaKnown RBP12.02□□□□□ -0.49
SIL1-208ENST00000505945 ADORA2BP29275 332 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 WASP42768 502 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 UAP1L1Q3KQV9 507 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 TRIM61Q5EBN2 209 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms