RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 LIPAP38571 399 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 MAPK9P45984 424 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 FSTL1Q12841 308 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 ATP1A4Q13733 1029 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 TEDDM1Q5T9Z0 273 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 ATPAF1Q5TC12 328 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 ANKRD45Q5TZF3 282 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 ABLIM2Q6H8Q1 611 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 RINT1Q6NUQ1 792 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 RFX8Q6ZV50 586 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 DTX2Q86UW9 622 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 ULK2Q8IYT8 1036 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 GALNT15Q8N3T1 639 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 EIF3CQ99613 913 aaKnown RBP5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 KATNAL1Q9BW62 490 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 VN1R3Q9BXE9 311 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 TMEM120AQ9BXJ8 343 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 SCAND2PQ9GZW5 306 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 BRD8Q9H0E9 1235 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 PCED1AQ9H1Q7 454 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 DKK2Q9UBU2 259 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 HERC5Q9UII4 1024 aaKnown RBP5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 CA14Q9ULX7 337 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 DTNAQ9Y4J8 743 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 HS3ST4Q9Y661 456 aa5.73□□□□□ -1.49
TRAPPC13-205ENST00000504243 TMEM191CA6NGB0 347 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 ADM5C9JUS6 153 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 AGPSO00116 658 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 IRAK2O43187 625 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 ITGA5P08648 1049 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 NR2F6P10588 404 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 CD19P15391 556 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 PAX3P23760 479 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 SLC5A2P31639 672 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 ATXN1P54253 815 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 POLE2P56282 527 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 PPFIA1Q13136 1202 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 FHL2Q14192 279 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 ABHD17BQ5VST6 288 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 JMJD6Q6NYC1 403 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 VWA1Q6PCB0 445 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 MAVSQ7Z434 540 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 ANKRD18AQ8IVF6 992 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 NRSN1Q8IZ57 195 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 SLC44A3Q8N4M1 653 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 LRRC71Q8N4P6 559 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 MBD3L2Q8NHZ7 208 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 TFAP2BQ92481 460 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 LARP4BQ92615 738 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 SORCS2Q96PQ0 1159 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 ISCA1Q9BUE6 129 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 SERHL2Q9H4I8 314 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 TMEM8AQ9HCN3 771 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 ITM2CQ9NQX7 267 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 KLC4Q9NSK0 619 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 KCTD5Q9NXV2 234 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 NKX1-2Q9UD57 310 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 STEAP1Q9UHE8 339 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 SLC27A6Q9Y2P4 619 aa5.72□□□□□ -1.49
TRAPPC13-205ENST00000504243 FER1L4A9Z1Z3 1794 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 PIPSLA2A3N6 862 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 IPO5O00410 1097 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 ACTL6BO94805 426 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 TIRAPP58753 221 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 TAP1Q03518 808 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 TAF12Q16514 161 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZNF618Q5T7W0 954 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 RAB11FIP4Q86YS3 637 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 P3H2Q8IVL5 708 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 LNX2Q8N448 690 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 SUPT20HQ8NEM7 779 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 WDR60Q8WVS4 1066 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 CAVIN3Q969G5 261 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZDHHC12Q96GR4 267 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZSCAN31Q96LW9 406 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 HAPLN3Q96S86 360 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 MLST8Q9BVC4 326 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 ALG8Q9BVK2 526 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 CYP4F11Q9HBI6 524 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 EHD3Q9NZN3 535 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 DKK3Q9UBP4 350 aa5.71□□□□□ -1.5
TRAPPC13-205ENST00000504243 PCDH17O14917 1159 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 NXPH3O95157 252 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 NTSR2O95665 410 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 ANXA6P08133 673 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 TMEM225BP0DP42 221 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 EGR2P11161 476 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 HSD3B1P14060 373 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZFXP17010 805 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 DRD1P21728 446 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 KLRK1P26718 216 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 GSTM5P46439 218 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 TGFB2P61812 414 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 AP2B1P63010 937 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 TIAL1Q01085 375 aaKnown RBP eCLIP5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 SCAPQ12770 1279 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 FOXO1Q12778 655 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 KLF10Q13118 480 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 BFSP2Q13515 415 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms