RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PI4K2AQ9BTU6 479 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 RUSC1Q9BVN2 902 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 C22orf23Q9BZE7 217 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 TRIM4Q9C037 500 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 MUC3BQ9H195 1237 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 TASP1Q9H6P5 420 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 C7orf69Q9H7B7 122 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 TTC12Q9H892 705 aaPredicted RBP3.93□□□□□ -1.78
USP46-205ENST00000504078 ECT2Q9H8V3 914 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 PRDM16Q9HAZ2 1276 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 IL21RQ9HBE5 538 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 TOPORSQ9NS56 1045 aaPredicted RBP3.93□□□□□ -1.78
USP46-205ENST00000504078 ANKEF1Q9NU02 776 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 THG1LQ9NWX6 298 aaKnown RBP3.93□□□□□ -1.78
USP46-205ENST00000504078 DUS2Q9NX74 493 aaKnown RBP3.93□□□□□ -1.78
USP46-205ENST00000504078 SMPD4Q9NXE4 827 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 CNTN3Q9P232 1028 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 CYP8B1Q9UNU6 501 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 PPME1Q9Y570 386 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 PLXNB3Q9ULL4 1909 aa3.93□□□□□ -1.78
USP46-205ENST00000504078 GCN1Q92616 2671 aaKnown RBP3.93□□□□□ -1.78
USP46-205ENST00000504078 ZNF638Q14966 1978 aaKnown RBP3.93□□□□□ -1.78
USP46-205ENST00000504078 ABCA7Q8IZY2 2146 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 TCHHQ07283 1943 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 CCDC163A0A0D9SF12 145 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 C2orf78A6NCI8 922 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 PP2D1A8MPX8 630 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 K7EQS6 105 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ABLIM1O14639 778 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 SLC16A4O15374 487 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ATG13O75143 517 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 HIP1RO75146 1068 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 BAG4O95429 457 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 CYP17A1P05093 508 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 KCNE1P15382 129 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 DRD1P21728 446 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ACAT1P24752 427 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 CDC25CP30307 473 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 KRT2P35908 639 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 OPRD1P41143 372 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 P2RY2P41231 377 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 NLRP12P59046 1061 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 CLDN10P78369 228 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 IL9RQ01113 521 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 PLAURQ03405 335 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 C19orf57Q0VDD7 668 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 IFRD2Q12894 506 aaPredicted RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 LMAN2Q12907 356 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 GRIK2Q13002 908 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 DMP1Q13316 513 aaPredicted RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 KRT32Q14532 448 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 NOLC1Q14978 699 aaKnown RBP eCLIP3.92□□□□□ -1.78
USP46-205ENST00000504078 TRIP6Q15654 476 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 ZRSR1Q15695 479 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 ZNF77Q15935 545 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ECM1Q16610 540 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ZNF423Q2M1K9 1284 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 GAB4Q2WGN9 574 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 SLC10A6Q3KNW5 377 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 MPZL3Q6UWV2 235 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 SLCO6A1Q86UG4 719 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 RASSF3Q86WH2 238 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 CATSPER3Q86XQ3 398 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 SYT12Q8IV01 421 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 SLC41A1Q8IVJ1 513 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 TRIM42Q8IWZ5 723 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 EFCAB13Q8IY85 973 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 RGL4Q8IZJ4 473 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 AGGF1Q8N302 714 aaeCLIP3.92□□□□□ -1.78
USP46-205ENST00000504078 SYNPOQ8N3V7 929 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ZCCHC9Q8N567 271 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 CAMKK1Q8N5S9 505 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ARL14EPQ8N8R7 260 aaPredicted RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 GLIS3Q8NEA6 775 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 BEST2Q8NFU1 509 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 SH3RF2Q8TEC5 729 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 USP33Q8TEY7 942 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 UTP4Q969X6 686 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 PLD4Q96BZ4 506 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 BICD1Q96G01 975 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 IFT74Q96LB3 600 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 CYP2S1Q96SQ9 504 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ACO2Q99798 780 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 TCHPQ9BT92 498 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.92□□□□□ -1.78
USP46-205ENST00000504078 MRPL4Q9BYD3 311 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 TRIM9Q9C026 710 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 GPR88Q9GZN0 384 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 HAPLN2Q9GZV7 340 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 BHMT2Q9H2M3 363 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 SH3GLB2Q9NR46 395 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 SLC38A7Q9NVC3 462 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 TMLHEQ9NVH6 421 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 CALCOCO1Q9P1Z2 691 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ZFATQ9P243 1243 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 EVLQ9UI08 416 aaPredicted RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 MMP17Q9ULZ9 603 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 TNFSF13BQ9Y275 285 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 BTBD3Q9Y2F9 522 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms