RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 SYCP2Q9BX26 1530 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 AP4M1O00189 453 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 PCDHGA12O60330 932 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 GAS8-AS1O95177 125 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 MT-CO1P00395 513 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 AHSGP02765 367 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 TGFB3P10600 412 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 CPEP16870 476 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 DEPDC1Q5TB30 811 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 DAB2IPQ5VWQ8 1189 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 MTHFD1LQ6UB35 978 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 ANKRD13BQ86YJ7 626 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 C1orf162Q8NEQ5 155 aaPredicted RBP4.23□□□□□ -1.73
PROM1-203ENST00000502943 FYTTD1Q96QD9 318 aaKnown RBP4.23□□□□□ -1.73
PROM1-203ENST00000502943 PCGF6Q9BYE7 350 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 TFCP2L1Q9NZI6 479 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 PCDHGA9Q9Y5G4 932 aaKnown RBP4.23□□□□□ -1.73
PROM1-203ENST00000502943 PCDHGA8Q9Y5G5 932 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 PCDHGA7Q9Y5G6 932 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 PCDHGA6Q9Y5G7 932 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 PCDHGA3Q9Y5H0 932 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 LRP5O75197 1615 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 TMEM2Q9UHN6 1383 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 PLEKHH2Q8IVE3 1493 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 NWD1Q149M9 1564 aa4.23□□□□□ -1.73
PROM1-203ENST00000502943 RTEL1-TNFRSF6BF6WH68 1400 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 ABCC3O15438 1527 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 EME2A4GXA9 379 aaPredicted RBP4.22□□□□□ -1.73
PROM1-203ENST00000502943 hCG_1984214I3L0E3 225 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 TULP3O75386 442 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 VNN1O95497 513 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 FTH1P19P0C7X4 201 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 PSG6Q00889 435 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 E2F2Q14209 437 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 IQCB1Q15051 598 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 SEC23BQ15437 767 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 INAVAQ3KP66 663 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 UAP1L1Q3KQV9 507 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 RNF219Q5W0B1 726 aaPredicted RBP4.22□□□□□ -1.73
PROM1-203ENST00000502943 ATG9BQ674R7 924 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 DEF8Q6ZN54 512 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 CBARPQ8N350 705 aaPredicted RBP4.22□□□□□ -1.73
PROM1-203ENST00000502943 CPA6Q8N4T0 437 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 C3orf20Q8ND61 904 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 CCDC17Q96LX7 622 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 ZPBPQ9BS86 351 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 DPCDQ9BVM2 203 aaPredicted RBP4.22□□□□□ -1.73
PROM1-203ENST00000502943 MRPL46Q9H2W6 279 aaKnown RBP4.22□□□□□ -1.73
PROM1-203ENST00000502943 MLXIPQ9HAP2 919 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 ZBTB40Q9NUA8 1239 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 MRPS17Q9Y2R5 130 aaKnown RBP4.22□□□□□ -1.73
PROM1-203ENST00000502943 CCNB3Q8WWL7 1395 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 NCOA2Q15596 1464 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 FYCO1Q9BQS8 1478 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 PLXNC1O60486 1568 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 TIAM1Q13009 1591 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 SHPRHQ149N8 1683 aa4.22□□□□□ -1.73
PROM1-203ENST00000502943 ZC3H13Q5T200 1668 aaKnown RBP4.22□□□□□ -1.73
PROM1-203ENST00000502943 ZNF644Q9H582 1327 aaPredicted RBP4.21□□□□□ -1.73
PROM1-203ENST00000502943 SETD5Q9C0A6 1442 aa4.21□□□□□ -1.73
PROM1-203ENST00000502943 NCOA3Q9Y6Q9 1424 aa4.21□□□□□ -1.73
PROM1-203ENST00000502943 MAP3K1Q13233 1512 aa4.21□□□□□ -1.73
PROM1-203ENST00000502943 LACTBL1A8MY62 500 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 XPOTO43592 962 aaKnown RBP4.21□□□□□ -1.74
PROM1-203ENST00000502943 SLC28A2O43868 658 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 CNOT3O75175 753 aaKnown RBP4.21□□□□□ -1.74
PROM1-203ENST00000502943 RNF8O76064 485 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 CSF1RP07333 972 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 CFHR1Q03591 330 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 IDI1Q13907 227 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 KRT27Q7Z3Y8 459 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 PPP1R3BQ86XI6 285 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 CNTD1Q8N815 330 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 PCSK9Q8NBP7 692 aaKnown RBP4.21□□□□□ -1.74
PROM1-203ENST00000502943 PRR25Q96S07 402 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 ABCF2Q9UG63 623 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 TBX22Q9Y458 520 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 ADGBQ8N7X0 1667 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 CFAP65Q6ZU64 1925 aaKnown RBP4.21□□□□□ -1.74
PROM1-203ENST00000502943 PREX2Q70Z35 1606 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 SLIT1O75093 1534 aa4.21□□□□□ -1.74
PROM1-203ENST00000502943 NKTRP30414 1462 aaKnown RBP4.2□□□□□ -1.74
PROM1-203ENST00000502943 ARHGAP23Q9P227 1491 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 PNPLA6Q8IY17 1366 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 KLHL33A6NCF5 533 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 BTBD19C9JJ37 291 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 PRKCBP05771 671 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 PLA2G2AP14555 144 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 TNFRSF1BP20333 461 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 ADORA2AP29274 412 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 MASP1P48740 699 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 PDE6CP51160 858 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 LY6KQ17RY6 165 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 DGKKQ5KSL6 1271 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 TMTC4Q5T4D3 741 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 CAND1Q86VP6 1230 aaKnown RBP4.2□□□□□ -1.74
PROM1-203ENST00000502943 RFX6Q8HWS3 928 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 UNC5CLQ8IV45 518 aa4.2□□□□□ -1.74
PROM1-203ENST00000502943 IGFBPL1Q8WX77 278 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms