RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CDO1Q16878 200 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 RAB6CQ53S08 254 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 OLFML1Q6UWY5 402 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 SOCS4Q8WXH5 440 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 LPIN3Q9BQK8 851 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 CALN1Q9BXU9 219 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 RAB6CQ9H0N0 254 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 PCDHGA4Q9Y5G9 962 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 XPOTO43592 962 aaKnown RBP14.37□□□□□ -0.11
VCP-207ENST00000493886 HCRTO43612 131 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 MAGEA4P43358 317 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 PURAQ00577 322 aaKnown RBP14.37□□□□□ -0.11
VCP-207ENST00000493886 MORF4L2Q15014 288 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 XKR4Q5GH76 650 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 ARHGAP17Q68EM7 881 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 CYP4V2Q6ZWL3 525 aaPredicted RBP14.37□□□□□ -0.11
VCP-207ENST00000493886 TMEM110Q86TL2 294 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 SESTD1Q86VW0 696 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 NME8Q8N427 588 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 C7orf31Q8N865 590 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 NSRP1Q9H0G5 558 aaKnown RBP14.37□□□□□ -0.11
VCP-207ENST00000493886 RSAD1Q9HA92 442 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 NMRK2Q9NPI5 230 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 TNPO2O14787 897 aaKnown RBP14.37□□□□□ -0.11
VCP-207ENST00000493886 SNX3O60493 162 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 IGHA2P01877 340 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 GNAT1P11488 350 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 KCNE1P15382 129 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 PECAM1P16284 738 aaPredicted RBP14.37□□□□□ -0.11
VCP-207ENST00000493886 CDH6P55285 790 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 SLC6A3Q01959 620 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 CCDC14Q49A88 953 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 RNASEH2BQ5TBB1 312 aaKnown RBP14.37□□□□□ -0.11
VCP-207ENST00000493886 FAM47EQ6ZV65 393 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 KBTBD7Q8WVZ9 684 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 CFAP57Q96MR6 1250 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 C10orf88Q9H8K7 445 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.37□□□□□ -0.11
VCP-207ENST00000493886 SPATS2LQ9NUQ6 558 aaKnown RBP14.37□□□□□ -0.11
VCP-207ENST00000493886 IPPQ9Y573 584 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 TRPM7Q96QT4 1865 aa14.37□□□□□ -0.11
VCP-207ENST00000493886 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 APOC4-APOC2K7ER74 178 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 SPTLC1O15269 473 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 PRPSAP2O60256 369 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 SKAP2O75563 359 aaPredicted RBP14.36□□□□□ -0.11
VCP-207ENST00000493886 ENDOD1O94919 500 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 APOC2P02655 101 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 PDGFRBP09619 1106 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 HOXC8P31273 242 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 USP4Q13107 963 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 MTM1Q13496 603 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 SCUBE3Q8IX30 993 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 SAYSD1Q9NPB0 183 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 TRIM33Q9UPN9 1127 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 DPYSL4O14531 572 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 PAPSS1O43252 624 aaPredicted RBP14.36□□□□□ -0.11
VCP-207ENST00000493886 TCEA3O75764 348 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 GABBR2O75899 941 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
VCP-207ENST00000493886 RPSAP08865 295 aaKnown RBP14.36□□□□□ -0.11
VCP-207ENST00000493886 FGFR1P11362 822 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 GNL1P36915 607 aaPredicted RBP14.36□□□□□ -0.11
VCP-207ENST00000493886 GDF10P55107 478 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 ATP11AP98196 1134 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 SOX4Q06945 474 aaPredicted RBP14.36□□□□□ -0.11
VCP-207ENST00000493886 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 TMED2Q15363 201 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 RGMBQ6NW40 437 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 SMG8Q8ND04 991 aaKnown RBP14.36□□□□□ -0.11
VCP-207ENST00000493886 STK32AQ8WU08 396 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 KHSRPQ92945 711 aaKnown RBP eCLIP14.36□□□□□ -0.111e-6■■□□□ 11.9
VCP-207ENST00000493886 GDAP2Q9NXN4 497 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 SLC12A4Q9UP95 1085 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 SHOC2Q9UQ13 582 aa14.36□□□□□ -0.11
VCP-207ENST00000493886 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.36□□□□□ -0.11
VCP-207ENST00000493886 NDC80O14777 642 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 AKR1A1P14550 325 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 PNPLA4P41247 253 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 TAF6P49848 677 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 SNX16P57768 344 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 ITIH4Q14624 930 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 KIRREL3Q8IZU9 778 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 CRYBG2Q8N1P7 616 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 TAB3Q8N5C8 712 aaPredicted RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 ARRDC4Q8NCT1 418 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 RSAD2Q8WXG1 361 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 PRCCQ92733 491 aaPredicted RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 MAK16Q9BXY0 300 aaKnown RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 ZFYVE28Q9HCC9 887 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 STK38LQ9Y2H1 464 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 L3MBTL1Q9Y468 752 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 A8MUI8 341 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 SPAG7O75391 227 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 PIAS1O75925 651 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms