RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 MBD3L4A6NDZ8 208 aaPredicted RBP4.43□□□□□ -1.7
RBM39-234ENST00000487604 MBD3L3A6NE82 208 aaPredicted RBP4.43□□□□□ -1.7
RBM39-234ENST00000487604 MYMKA6NI61 221 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 H3BNC9 293 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 AGPSO00116 658 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 RRP9O43818 475 aaKnown RBP4.43□□□□□ -1.7
RBM39-234ENST00000487604 MARCH6O60337 910 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 SNHG28P0DPA3 235 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 HOXB6P17509 224 aaKnown RBP4.43□□□□□ -1.7
RBM39-234ENST00000487604 PTDSS1P48651 473 aaKnown RBP4.43□□□□□ -1.7
RBM39-234ENST00000487604 GATMP50440 423 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 ITGA8P53708 1063 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 HTRA4P83105 476 aaPredicted RBP4.43□□□□□ -1.7
RBM39-234ENST00000487604 TRIM71Q2Q1W2 868 aaKnown RBP4.43□□□□□ -1.7
RBM39-234ENST00000487604 TMTC4Q5T4D3 741 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 RANBP10Q6VN20 620 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 DCDC5Q6ZRR9 648 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 PIP4P1Q86T03 277 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 CHPFQ8IZ52 775 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 SACM1LQ9NTJ5 587 aa4.43□□□□□ -1.7
RBM39-234ENST00000487604 ISM1B1AKI9 464 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 EXOC5O00471 708 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 CCP110O43303 1012 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 TMPRSS11DO60235 418 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 RNF8O76064 485 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 TMEM191BP0C7N4 346 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 MTHFSP49914 203 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 ZNF91Q05481 1191 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 TWIST1Q15672 202 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 C3orf38Q5JPI3 329 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 TMEM63BQ5T3F8 832 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 DENND2CQ68D51 928 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 RAVER1Q8IY67 606 aaKnown RBP4.42□□□□□ -1.7
RBM39-234ENST00000487604 METTL25Q8N6Q8 603 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 NMD3Q96D46 503 aaKnown RBP4.42□□□□□ -1.7
RBM39-234ENST00000487604 EDC3Q96F86 508 aaKnown RBP4.42□□□□□ -1.7
RBM39-234ENST00000487604 STK31Q9BXU1 1019 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 DHX36Q9H2U1 1008 aaKnown RBP4.42□□□□□ -1.7
RBM39-234ENST00000487604 EBF3Q9H4W6 596 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 TRIM36Q9NQ86 728 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 TMEM184CQ9NVA4 438 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 TPCN1Q9ULQ1 816 aa4.42□□□□□ -1.7
RBM39-234ENST00000487604 THRAP3Q9Y2W1 955 aaKnown RBP4.42□□□□□ -1.7
RBM39-234ENST00000487604 PRPF3O43395 683 aaKnown RBP4.41□□□□□ -1.7
RBM39-234ENST00000487604 FRS3O43559 492 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 RASSF9O75901 435 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 PARP1P09874 1014 aaKnown RBP4.41□□□□□ -1.7
RBM39-234ENST00000487604 CYP19A1P11511 503 aaPredicted RBP4.41□□□□□ -1.7
RBM39-234ENST00000487604 KLRC1P26715 233 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 MCM5P33992 734 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 THBS4P35443 961 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 PGDP52209 483 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 IGBP1P78318 339 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 FMO1Q01740 532 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 CFHR3Q02985 330 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 CFHR1Q03591 330 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 ARHGEF7Q14155 803 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 KCNB1Q14721 858 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 CNN3Q15417 329 aaKnown RBP4.41□□□□□ -1.7
RBM39-234ENST00000487604 CNGA2Q16280 664 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 ZNF750Q32MQ0 723 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 CXorf57Q6NSI4 855 aaKnown RBP4.41□□□□□ -1.7
RBM39-234ENST00000487604 CRELD2Q6UXH1 353 aaPredicted RBP4.41□□□□□ -1.7
RBM39-234ENST00000487604 DEF8Q6ZN54 512 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 ZDHHC17Q8IUH5 632 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 WASF1Q92558 559 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 KAZALD1Q96I82 304 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 PI4KBQ9UBF8 816 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 AFF4Q9UHB7 1163 aaKnown RBP4.41□□□□□ -1.7
RBM39-234ENST00000487604 ASAP1Q9ULH1 1129 aa4.41□□□□□ -1.7
RBM39-234ENST00000487604 NOB1Q9ULX3 412 aaKnown RBP4.41□□□□□ -1.7
RBM39-234ENST00000487604 FAM227AF5H4B4 570 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 RAB27BO00194 218 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 CLIC1O00299 241 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 TLR2O60603 784 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 PIAS2O75928 621 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 IL1R1P14778 569 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 BRAFP15056 766 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 CCKBRP32239 447 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 DEUP1Q05D60 604 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 SRSF1Q07955 248 aaKnown RBP eCLIP4.4□□□□□ -1.71
RBM39-234ENST00000487604 RAPGEF1Q13905 1077 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 LEXMQ3ZCV2 418 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 VSTM1Q6UX27 236 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 C12orf76Q8N812 135 aaPredicted RBP4.4□□□□□ -1.71
RBM39-234ENST00000487604 C11orf44Q8N8P7 122 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 NSMCE1Q8WV22 266 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 IGFBPL1Q8WX77 278 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 HS6ST2Q96MM7 605 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 FOXP1Q9H334 677 aaPredicted RBP4.4□□□□□ -1.71
RBM39-234ENST00000487604 COL20A1Q9P218 1284 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 DKK4Q9UBT3 224 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 HDAC9Q9UKV0 1011 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 RIMKLBQ9ULI2 386 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 ZMYM2Q9UBW7 1377 aa4.4□□□□□ -1.71
RBM39-234ENST00000487604 A6NNZ2 444 aa4.39□□□□□ -1.71
RBM39-234ENST00000487604 CTSAP10619 480 aa4.39□□□□□ -1.71
RBM39-234ENST00000487604 ZKSCAN1P17029 563 aaPredicted RBP4.39□□□□□ -1.71
RBM39-234ENST00000487604 RPS16P62249 146 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms