RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ZNF333Q96JL9 665 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 CFAP57Q96MR6 1250 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 CASD1Q96PB1 797 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 RNF157Q96PX1 679 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 PEBP4Q96S96 227 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 NPY6RQ99463 290 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 SH3GL2Q99962 352 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 MAK16Q9BXY0 300 aaKnown RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 HIPK3Q9H422 1215 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 ZWILCHQ9H900 591 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 POPDC2Q9HBU9 364 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 DMAP1Q9NPF5 467 aaPredicted RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 R3HDM2Q9Y2K5 976 aaKnown RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 SNX24Q9Y343 169 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 GOLGA6BA6NDN3 693 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 OR6C75A6NL08 312 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 CLDN5O00501 218 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 CST8O60676 142 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 F9P00740 461 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 ALDH2P05091 517 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 FAM153BP0C7A2 387 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 KRT10P13645 584 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 TGM2P21980 687 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 KLRC2P26717 231 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 STIP1P31948 543 aaKnown RBP12.14□□□□□ -0.47
PRKCB-207ENST00000486868 MAGEA11P43364 429 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 KCNJ1P48048 391 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 TKTL1P51854 596 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 CDH6P55285 790 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 MAP3K7CLP57077 242 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 RNASELQ05823 741 aaKnown RBP12.14□□□□□ -0.47
PRKCB-207ENST00000486868 FAAP100Q0VG06 881 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 DPYSL3Q14195 570 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 TAF5Q15542 800 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 TRADDQ15628 312 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 C15orf59Q2T9L4 293 aaPredicted RBP12.14□□□□□ -0.47
PRKCB-207ENST00000486868 FAM153CQ494X1 144 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 RHBDF2Q6PJF5 856 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 VSTM1Q6UX27 236 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 TMC3Q7Z5M5 1100 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 CTU1Q7Z7A3 348 aaKnown RBP12.14□□□□□ -0.47
PRKCB-207ENST00000486868 CROCCP2Q86T23 111 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 DDX42Q86XP3 938 aaKnown RBP eCLIP12.14□□□□□ -0.47
PRKCB-207ENST00000486868 ZNF280BQ86YH2 543 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 RELL1Q8IUW5 271 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 DEFB106AQ8N104 65 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 NTAN1Q96AB6 310 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 PHACTR1Q9C0D0 580 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 ZCWPW1Q9H0M4 648 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 DPH5Q9H2P9 285 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 NRDE2Q9H7Z3 1164 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 PCDH9Q9HC56 1237 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 PCDH18Q9HCL0 1135 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 NGRNQ9NPE2 291 aaKnown RBP12.14□□□□□ -0.47
PRKCB-207ENST00000486868 CACNG4Q9UBN1 327 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 PCSK1NQ9UHG2 260 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 FAM153AQ9UHL3 310 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 LRFN2Q9ULH4 789 aa12.14□□□□□ -0.47
PRKCB-207ENST00000486868 TIMM13Q9Y5L4 95 aaPredicted RBP12.14□□□□□ -0.47
PRKCB-207ENST00000486868 CFAP69A5D8W1 941 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 AGPSO00116 658 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 PIK3R2O00459 728 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 PQBP1O60828 265 aaKnown RBP12.13□□□□□ -0.47
PRKCB-207ENST00000486868 TADA2AO75478 443 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 GRAP2O75791 330 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 BEST1O76090 585 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 ZBED1O96006 694 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 RARGP13631 454 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 ATF2P15336 505 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 FGFR3P22607 806 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 RDXP35241 583 aaKnown RBP12.13□□□□□ -0.47
PRKCB-207ENST00000486868 NR2C2P49116 596 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 EIF3BP55884 814 aaKnown RBP12.13□□□□□ -0.47
PRKCB-207ENST00000486868 ATP11AP98196 1134 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 ADCY2Q08462 1091 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 SCAPQ12770 1279 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 KRT81Q14533 505 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 SMTNL2Q2TAL5 461 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 KCNT1Q5JUK3 1230 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 SH3PXD2AQ5TCZ1 1133 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 KAZNQ674X7 775 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 SLC9A4Q6AI14 798 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 BZW1Q7L1Q6 419 aaKnown RBP12.13□□□□□ -0.47
PRKCB-207ENST00000486868 TSEN2Q8NCE0 465 aaKnown RBP12.13□□□□□ -0.47
PRKCB-207ENST00000486868 OR10T2Q8NGX3 314 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 FBXO25Q8TCJ0 367 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 ATG4AQ8WYN0 398 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 CEP295NLQ96MC4 621 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 HINFPQ9BQA5 517 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 SNRNP25Q9BV90 132 aaKnown RBP12.13□□□□□ -0.47
PRKCB-207ENST00000486868 ULBP1Q9BZM6 244 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 NEUROG2Q9H2A3 272 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.13□□□□□ -0.47
PRKCB-207ENST00000486868 COMMD8Q9NX08 183 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 ASIC3Q9UHC3 531 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 ADAM28Q9UKQ2 775 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 TBX21Q9UL17 535 aa12.13□□□□□ -0.47
PRKCB-207ENST00000486868 DNPEPQ9ULA0 475 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms