RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PIK3AP1Q6ZUJ8 805 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 TRMT11Q7Z4G4 463 aaKnown RBP8.88□□□□□ -0.99
XRN1-212ENST00000486211 CATSPER3Q86XQ3 398 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 ETFBKMTQ8IXQ9 262 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 KIAA1958Q8N8K9 716 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 IPO4Q8TEX9 1081 aaKnown RBP8.88□□□□□ -0.99
XRN1-212ENST00000486211 ERLEC1Q96DZ1 483 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 ACOX2Q99424 681 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 NAP1L4Q99733 375 aaKnown RBP8.88□□□□□ -0.99
XRN1-212ENST00000486211 MIR1-1HGQ9H1L0 117 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 PLEKHA5Q9HAU0 1116 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 WSB2Q9NYS7 404 aaPredicted RBP8.88□□□□□ -0.99
XRN1-212ENST00000486211 ARHGAP28Q9P2N2 729 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 UXTQ9UBK9 157 aaPredicted RBP8.88□□□□□ -0.99
XRN1-212ENST00000486211 UBQLN1Q9UMX0 589 aaKnown RBP8.88□□□□□ -0.99
XRN1-212ENST00000486211 KCNJ14Q9UNX9 436 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 MYOFQ9NZM1 2061 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 NOTCH2Q04721 2471 aa8.88□□□□□ -0.99
XRN1-212ENST00000486211 KNL1Q8NG31 2342 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.87□□□□□ -0.99
XRN1-212ENST00000486211 SCAMP3O14828 347 aaKnown RBP8.87□□□□□ -0.99
XRN1-212ENST00000486211 DEXIO95424 95 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 ADH5P11766 374 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 NCAM1P13591 858 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 HDCP19113 662 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 TNFSF9P41273 254 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 NPTX2P47972 431 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 UCNP55089 124 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 KCNB1Q14721 858 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 NOLC1Q14978 699 aaKnown RBP eCLIP8.87□□□□□ -0.99
XRN1-212ENST00000486211 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
XRN1-212ENST00000486211 DDR2Q16832 855 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 HES3Q5TGS1 186 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 DCAF12L1Q5VU92 463 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 EGFLAMQ63HQ2 1017 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 FBXL19Q6PCT2 694 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 ZNF574Q6ZN55 896 aaPredicted RBP8.87□□□□□ -0.99
XRN1-212ENST00000486211 FBXL16Q8N461 479 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 CADM4Q8NFZ8 388 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 ITPKCQ96DU7 683 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 TOE1Q96GM8 510 aaKnown RBP8.87□□□□□ -0.99
XRN1-212ENST00000486211 HIC2Q96JB3 615 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 IFT74Q96LB3 600 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 LGMNQ99538 433 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 GABRG3Q99928 467 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 TCHPQ9BT92 498 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 GPR174Q9BXC1 333 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 AGXT2Q9BYV1 514 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 ZFAND3Q9H8U3 227 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 TUFT1Q9NNX1 390 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 ANO2Q9NQ90 1003 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 USP36Q9P275 1121 aaKnown RBP8.87□□□□□ -0.99
XRN1-212ENST00000486211 FTSJ1Q9UET6 329 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 STARD13Q9Y3M8 1113 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 PCDHB5Q9Y5E4 795 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.87□□□□□ -0.99
XRN1-212ENST00000486211 SNX11Q9Y5W9 270 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 NBPF19A0A087WUL8 3843 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 FLNCQ14315 2725 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 AHCTF1Q8WYP5 2266 aa8.87□□□□□ -0.99
XRN1-212ENST00000486211 ARHGEF35A5YM69 484 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 TBC1D3BA6NDS4 549 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 METTL12A8MUP2 240 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 CBX4O00257 560 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 PAPSS1O43252 624 aaPredicted RBP8.86□□□□□ -0.99
XRN1-212ENST00000486211 MAN1A2O60476 641 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 PRPF40AO75400 957 aaKnown RBP8.86□□□□□ -0.99
XRN1-212ENST00000486211 RFPL3O75679 317 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 NFICP08651 508 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 PDIA3P30101 505 aaKnown RBP8.86□□□□□ -0.99
XRN1-212ENST00000486211 CSNK1EP49674 416 aaKnown RBP8.86□□□□□ -0.99
XRN1-212ENST00000486211 EVCP57679 992 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 CCT2P78371 535 aaKnown RBP8.86□□□□□ -0.99
XRN1-212ENST00000486211 SSRP1Q08945 709 aaKnown RBP8.86□□□□□ -0.99
XRN1-212ENST00000486211 AAMPQ13685 434 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 CALCRLQ16602 461 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 C10orf76Q5T2E6 689 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 SPATA1Q5VX52 437 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 C9orf57Q5W0N0 161 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 TERB1Q8NA31 727 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 ZNF248Q8NDW4 579 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 ENGASEQ8NFI3 743 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 KIFAP3Q92845 792 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 NAF1Q96HR8 494 aaKnown RBP8.86□□□□□ -0.99
XRN1-212ENST00000486211 FAM117AQ9C073 453 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 HAPLN2Q9GZV7 340 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 EIF2B4Q9UI10 523 aaKnown RBP8.86□□□□□ -0.99
XRN1-212ENST00000486211 DSEQ9UL01 958 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 RAD54BQ9Y620 910 aa8.86□□□□□ -0.99
XRN1-212ENST00000486211 E2F8A0AVK6 867 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 ANO9A1A5B4 782 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 CCDC169A6NNP5 214 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 LACTBL1A8MY62 500 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 KCNJ18B7U540 433 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 H0Y8X5 98 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 PIRO00625 290 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 KCNK3O14649 394 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 ENC1O14682 589 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 TRIM24O15164 1050 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms