RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PNLIPP16233 465 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 CAPN2P17655 700 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 KELP23276 732 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 PRKAR1BP31321 381 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 NF2P35240 595 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 VPS41P49754 854 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 PEX5P50542 639 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 TUBP50607 506 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 HK3P52790 923 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 RAB1AP62820 205 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 RBP5P82980 135 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 COG7P83436 770 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 CDK17Q00537 523 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 ITIH3Q06033 890 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 FOXO1Q12778 655 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 BNIP1Q12981 228 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 MAPK7Q13164 816 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 SGCGQ13326 291 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 TRPC3Q13507 836 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 CUL2Q13617 745 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 TUBA3CQ13748 450 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 LAMB3Q13751 1172 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 MXD4Q14582 209 aaPredicted RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 C2orf76Q3KRA6 126 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 C3orf36Q3SXR2 165 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 XKR9Q5GH70 373 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 AADACL4Q5VUY2 407 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 CAPRIN2Q6IMN6 1127 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 KLC3Q6P597 504 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 FAM180AQ6UWF9 173 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 CEP128Q6ZU80 1094 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 CENPQQ7L2Z9 268 aaPredicted RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 PRRT2Q7Z6L0 340 aaPredicted RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 LRRTM4Q86VH4 590 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 RAB11FIP4Q86YS3 637 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 DCP2Q8IU60 420 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 EFCAB13Q8IY85 973 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 ATP11CQ8NB49 1132 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 NETO2Q8NC67 525 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 ETNPPLQ8TBG4 499 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 CLEC4DQ8WXI8 215 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 RIN2Q8WYP3 895 aaPredicted RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 RFFLQ8WZ73 363 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 SGCDQ92629 289 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 KRT35Q92764 455 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 SHISA4Q96DD7 197 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 MAELQ96JY0 434 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 CABS1Q96KC9 395 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 CRACR2AQ9BSW2 395 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 G6PC3Q9BUM1 346 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 SGPP1Q9BX95 441 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 PRDM12Q9H4Q4 367 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 THAP9Q9H5L6 903 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 INCENPQ9NQS7 918 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 HSPBP1Q9NZL4 362 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 COX16Q9P0S2 106 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 LRFN1Q9P244 771 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 SRP68Q9UHB9 627 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 MBD1Q9UIS9 605 aaPredicted RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 ARHGAP26Q9UNA1 814 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 TMEM5Q9Y2B1 443 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 RWDD3Q9Y3V2 267 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 SNX13Q9Y5W8 968 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 NR2E3Q9Y5X4 410 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 RAB3GAP2Q9H2M9 1393 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TOP2BQ02880 1626 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TTC21BQ7Z4L5 1316 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CTAGE15A4D2H0 777 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 POLR2DO15514 142 aaKnown RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 NCK2O43639 380 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 FMO6PO60774 539 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TSPAN9O75954 239 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TRIM16O95361 564 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 NPPAP01160 153 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ADRB1P08588 477 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CTAGE8P0CG41 777 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 PDGFRAP16234 1089 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TSHRP16473 764 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CHMP24386 653 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 AOAHP28039 575 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 GDI1P31150 447 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 HOXD13P35453 343 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 GPC3P51654 580 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ARFIP1P53367 373 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 RTP1P59025 263 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 NKX6-1P78426 367 aaPredicted RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 IFI35P80217 286 aaPredicted RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 MGAT2Q10469 447 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CETN1Q12798 172 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 AIMP1Q12904 312 aaKnown RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 RALGDSQ12967 914 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 COASYQ13057 564 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 DAG1Q14118 895 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 SSPNQ14714 243 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 WDR43Q15061 677 aaKnown RBP eCLIP4.8□□□□□ -1.64
RTN4-213ENST00000485749 TDRD12Q587J7 1177 aaKnown RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 PRAMEF9Q5VWM5 478 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 SLFN12LQ6IEE8 588 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms