RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 FAM83CQ9BQN1 747 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 ULBP1Q9BZM6 244 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 LRRC4Q9HBW1 653 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 MYH10P35580 1976 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.33
DDR1-246ENST00000485023 KIF26AQ9ULI4 1882 aaPredicted RBP17.08■□□□□ 0.33
DDR1-246ENST00000485023 OTOL1A6NHN0 477 aaPredicted RBP17.08■□□□□ 0.32
DDR1-246ENST00000485023 BECN2A8MW95 431 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 THAP12O43422 761 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 TPM2P07951 284 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 SETSIPP0DME0 302 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 RARGP13631 454 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 LCP1P13796 627 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 PFKLP17858 780 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 GNA15P30679 374 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 KCNMA1Q12791 1236 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 RUNX3Q13761 415 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 RAPGEF1Q13905 1077 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 ITPRIPL2Q3MIP1 535 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 SNX30Q5VWJ9 437 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 TXNDC11Q6PKC3 985 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 CCDC186Q7Z3E2 898 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 SCD5Q86SK9 330 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 OSCP1Q8WVF1 389 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 ZFRQ96KR1 1074 aaKnown RBP17.08■□□□□ 0.32
DDR1-246ENST00000485023 FHOD1Q9Y613 1164 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 USP3Q9Y6I4 520 aa17.08■□□□□ 0.32
DDR1-246ENST00000485023 MAN2B1O00754 1011 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 GLULP15104 373 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 CTHP32929 405 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 PLA2G4AP47712 749 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 KLK7P49862 253 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 TUBP50607 506 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 COPB1P53618 953 aaKnown RBP17.07■□□□□ 0.32
DDR1-246ENST00000485023 NCAPHQ15003 741 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 PDGFRLQ15198 375 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 CNGA2Q16280 664 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 PKDCCQ504Y2 493 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 RAB41Q5JT25 222 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 C10orf120Q5SQS8 335 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 DENND1BQ6P3S1 775 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 SHC3Q92529 594 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 WBP2Q969T9 261 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 FAM81BQ96LP2 452 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 NAT10Q9H0A0 1025 aaKnown RBP17.07■□□□□ 0.32
DDR1-246ENST00000485023 LINC00597Q9H2U6 94 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.07■□□□□ 0.32
DDR1-246ENST00000485023 RASAL2Q9UJF2 1139 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 CNTN6Q9UQ52 1028 aa17.07■□□□□ 0.32
DDR1-246ENST00000485023 MRPS17Q9Y2R5 130 aaKnown RBP17.07■□□□□ 0.32
DDR1-246ENST00000485023 ZBED1O96006 694 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 CDK11BP21127 795 aaKnown RBP17.06■□□□□ 0.32
DDR1-246ENST00000485023 YWHAGP61981 247 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDR1-246ENST00000485023 PON2Q15165 354 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 STILQ15468 1287 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 EML3Q32P44 896 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 NAIF1Q69YI7 327 aaPredicted RBP17.06■□□□□ 0.32
DDR1-246ENST00000485023 PMF1Q6P1K2 205 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 MIB1Q86YT6 1006 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 CPA6Q8N4T0 437 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 DTWD2Q8NBA8 298 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 ANKRD20A12PQ8NF67 263 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 UBXN6Q9BZV1 441 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 C8orf33Q9H7E9 229 aaPredicted RBP17.06■□□□□ 0.32
DDR1-246ENST00000485023 CYLDQ9NQC7 956 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 SH3BP1Q9Y3L3 701 aa17.06■□□□□ 0.32
DDR1-246ENST00000485023 ZDBF2Q9HCK1 2354 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 GALR2O43603 387 aaPredicted RBP17.05■□□□□ 0.32
DDR1-246ENST00000485023 RALAP11233 206 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 ATP1A3P13637 1013 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 TCF3P15923 654 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 PTMSP20962 102 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 ATP5C1P36542 298 aaKnown RBP17.05■□□□□ 0.32
DDR1-246ENST00000485023 EFEMP1Q12805 493 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 FKBP15Q5T1M5 1219 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 DPY19L2P1Q6NXN4 242 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 RSRC2Q7L4I2 434 aaKnown RBP17.05■□□□□ 0.32
DDR1-246ENST00000485023 RALGPS2Q86X27 583 aaPredicted RBP17.05■□□□□ 0.32
DDR1-246ENST00000485023 DDX42Q86XP3 938 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDR1-246ENST00000485023 PASD1Q8IV76 773 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 SLC35F5Q8WV83 523 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 ATP2A3Q93084 1043 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 PCMTD1Q96MG8 357 aaPredicted RBP17.05■□□□□ 0.32
DDR1-246ENST00000485023 MIS12Q9H081 205 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 HSD3B7Q9H2F3 369 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 ECT2Q9H8V3 914 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 ST7Q9NRC1 585 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 RBM12Q9NTZ6 932 aaKnown RBP17.05■□□□□ 0.32
DDR1-246ENST00000485023 DLGAP2Q9P1A6 1054 aa17.05■□□□□ 0.32
DDR1-246ENST00000485023 LIMA1Q9UHB6 759 aaKnown RBP17.05■□□□□ 0.32
DDR1-246ENST00000485023 ZNF318Q5VUA4 2279 aa17.04■□□□□ 0.32
DDR1-246ENST00000485023 FAM170AA1A519 330 aa17.04■□□□□ 0.32
DDR1-246ENST00000485023 H0Y858 1186 aa17.04■□□□□ 0.32
DDR1-246ENST00000485023 FOXN3O00409 490 aaPredicted RBP17.04■□□□□ 0.32
DDR1-246ENST00000485023 MED7O43513 233 aa17.04■□□□□ 0.32
DDR1-246ENST00000485023 GABBR2O75899 941 aa17.04■□□□□ 0.32
DDR1-246ENST00000485023 HMBSP08397 361 aa17.04■□□□□ 0.32
DDR1-246ENST00000485023 ZNF18P17022 549 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms