RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 PAPSS1O43252 624 aaPredicted RBP16.47■□□□□ 0.23
RXRA-202ENST00000481739 FGFR1P11362 822 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 LHX1P48742 406 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 RGS7P49802 495 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 B3GALNT2Q8NCR0 500 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 APBB2Q92870 758 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 MAK16Q9BXY0 300 aaKnown RBP16.47■□□□□ 0.23
RXRA-202ENST00000481739 CDC42EP4Q9H3Q1 356 aaKnown RBP16.47■□□□□ 0.23
RXRA-202ENST00000481739 CENPHQ9H3R5 247 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 DPEP3Q9H4B8 488 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 CNOT10Q9H9A5 744 aaKnown RBP16.47■□□□□ 0.23
RXRA-202ENST00000481739 PRDM5Q9NQX1 630 aaPredicted RBP16.47■□□□□ 0.23
RXRA-202ENST00000481739 CWC15Q9P013 229 aaKnown RBP16.47■□□□□ 0.23
RXRA-202ENST00000481739 PCSK1NQ9UHG2 260 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 SHOC2Q9UQ13 582 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 TANC1Q9C0D5 1861 aa16.47■□□□□ 0.23
RXRA-202ENST00000481739 ENPP3O14638 875 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 GABRDO14764 452 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 MCF2LO15068 1137 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 PARNO95453 639 aaKnown RBP16.46■□□□□ 0.23
RXRA-202ENST00000481739 TTC4O95801 387 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 AGTP01019 485 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 PLCB3Q01970 1234 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 TRIP13Q15645 432 aaPredicted RBP16.46■□□□□ 0.23
RXRA-202ENST00000481739 CCDC14Q49A88 953 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 KCNT1Q5JUK3 1230 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 EFHC1Q5JVL4 640 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 MFSD5Q6N075 450 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 GLB1LQ6UWU2 654 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 CCDC25Q86WR0 208 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 ACTL9Q8TC94 416 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 TLCD1Q96CP7 247 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 AAASQ9NRG9 546 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 CACNG4Q9UBN1 327 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 TPX2Q9ULW0 747 aaKnown RBP16.46■□□□□ 0.23
RXRA-202ENST00000481739 TDRD15B5MCY1 1934 aaKnown RBP16.46■□□□□ 0.23
RXRA-202ENST00000481739 TET1Q8NFU7 2136 aa16.46■□□□□ 0.23
RXRA-202ENST00000481739 CASTOR2A6NHX0 329 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 CYB561D2O14569 222 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 EIF3HO15372 352 aaKnown RBP eCLIP16.45■□□□□ 0.22
RXRA-202ENST00000481739 PDGFRBP09619 1106 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 IRAK1P51617 712 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 ARSEP51690 589 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 CDH6P55285 790 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 FAM189BP81408 668 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 OTUD4Q01804 1114 aaKnown RBP16.45■□□□□ 0.22
RXRA-202ENST00000481739 ZSCAN26Q16670 478 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 P3H1Q32P28 736 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 RFX6Q8HWS3 928 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 HSPH1Q92598 858 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 ACSF2Q96CM8 615 aaPredicted RBP16.45■□□□□ 0.22
RXRA-202ENST00000481739 TTC25Q96NG3 672 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 ZNF670Q9BS34 389 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 PRDM16Q9HAZ2 1276 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.45■□□□□ 0.228e-7■■■□□ 15.7
RXRA-202ENST00000481739 TBX21Q9UL17 535 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 LRFN2Q9ULH4 789 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 SGK1O00141 431 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 TULP2O00295 520 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 TCEA3O75764 348 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 ABHD2P08910 425 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 CCDC130P13994 396 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 LMO2P25791 158 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 ADORA2BP29275 332 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 ATP5DP30049 168 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 STIP1P31948 543 aaKnown RBP16.45■□□□□ 0.22
RXRA-202ENST00000481739 CLCNKBP51801 687 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 PPP2R2AP63151 447 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 GNGT1P63211 74 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 GRIK3Q13003 919 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 TRNP1Q6NT89 227 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 CYP4V2Q6ZWL3 525 aaPredicted RBP16.45■□□□□ 0.22
RXRA-202ENST00000481739 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 FAM172AQ8WUF8 416 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 KCTD13Q8WZ19 329 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 CENPIQ92674 756 aaPredicted RBP16.45■□□□□ 0.22
RXRA-202ENST00000481739 KHSRPQ92945 711 aaKnown RBP eCLIP16.45■□□□□ 0.226e-6■■■□□ 18.4
RXRA-202ENST00000481739 PIWIL1Q96J94 861 aaKnown RBP16.45■□□□□ 0.22
RXRA-202ENST00000481739 CALN1Q9BXU9 219 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 DUSP16Q9BY84 665 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 PCDHB7Q9Y5E2 793 aa16.45■□□□□ 0.22
RXRA-202ENST00000481739 ERICH4A6NGS2 130 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 RASGRF2O14827 1237 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 RGS16O15492 202 aaPredicted RBP16.44■□□□□ 0.22
RXRA-202ENST00000481739 TGM2P21980 687 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 VPS41P49754 854 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 KRT81Q14533 505 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 TCTN1Q2MV58 587 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 STRADAQ7RTN6 431 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 PSTKQ8IV42 348 aaKnown RBP16.44■□□□□ 0.22
RXRA-202ENST00000481739 SCUBE3Q8IX30 993 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 URGCPQ8TCY9 931 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.44■□□□□ 0.22
RXRA-202ENST00000481739 RSAD2Q8WXG1 361 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 CFAP57Q96MR6 1250 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 SERPINB12Q96P63 405 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 PEBP4Q96S96 227 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 FAM118BQ9BPY3 351 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
RXRA-202ENST00000481739 NGRNQ9NPE2 291 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms