RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SNX19Q92543 992 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 ZFRQ96KR1 1074 aaKnown RBP11.92□□□□□ -0.5
CCDC18-208ENST00000479653 MSTO1Q9BUK6 570 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 CPNE5Q9HCH3 593 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 CD248Q9HCU0 757 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 ITM2CQ9NQX7 267 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 IL17BQ9UHF5 180 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 DERAQ9Y315 318 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 STARD13Q9Y3M8 1113 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 CITO14578 2027 aa11.92□□□□□ -0.5
CCDC18-208ENST00000479653 ZNF840PA6NDX5 716 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 WASH3PC4AMC7 463 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 BRINP1O60477 761 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 HUS1O60921 280 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 ADSSP30520 456 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 GRIK1P39086 918 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 ACOT2P49753 483 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 CCT8P50990 548 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 AFF3P51826 1226 aaKnown RBP11.91□□□□□ -0.5
CCDC18-208ENST00000479653 TMPRSS3P57727 454 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 USP46P62068 366 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 TEAD4Q15561 434 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 INAVAQ3KP66 663 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 CFAP221Q4G0U5 840 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 GRAMD4Q6IC98 578 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 DENND5BQ6ZUT9 1274 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 DDX42Q86XP3 938 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC18-208ENST00000479653 TMEM25Q86YD3 366 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 GABRG3Q99928 467 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 TRIM4Q9C037 500 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 CCSER1Q9C0I3 900 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 DNAJC17Q9NVM6 304 aaKnown RBP11.91□□□□□ -0.5
CCDC18-208ENST00000479653 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
CCDC18-208ENST00000479653 ANKRD6Q9Y2G4 727 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 KNTC1P50748 2209 aa11.91□□□□□ -0.5
CCDC18-208ENST00000479653 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 E2F8A0AVK6 867 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 KCNJ18B7U540 433 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 H0Y8X5 98 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 ENC1O14682 589 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 TRIM66O15016 1216 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 HOXC11O43248 304 aaPredicted RBP11.9□□□□□ -0.5
CCDC18-208ENST00000479653 FAM189A1O60320 539 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 PCDHGA12O60330 932 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 RFPL3O75679 317 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 ANXA13P27216 316 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 OXTRP30559 389 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 DNAJC3Q13217 504 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 TRIM29Q14134 588 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 PKDCCQ504Y2 493 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 HES3Q5TGS1 186 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 FUBP3Q96I24 572 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC18-208ENST00000479653 ASB7Q9H672 318 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 SPHK2Q9NRA0 654 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 MAGEC2Q9UBF1 373 aaPredicted RBP11.9□□□□□ -0.5
CCDC18-208ENST00000479653 L1RE1Q9UN81 338 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 SH3BP1Q9Y3L3 701 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 HEMK1Q9Y5R4 338 aaPredicted RBP11.9□□□□□ -0.5
CCDC18-208ENST00000479653 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
CCDC18-208ENST00000479653 MUC22E2RYF6 1773 aaPredicted RBP11.9□□□□□ -0.51
CCDC18-208ENST00000479653 MYO9AB2RTY4 2548 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 A0A0B4J269 797 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 PRRT4C9JH25 899 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 H0YCG3 227 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 CBX4O00257 560 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 HCRTO43612 131 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 LDOC1O95751 146 aaPredicted RBP11.89□□□□□ -0.51
CCDC18-208ENST00000479653 ACADMP11310 421 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 CDK4P11802 303 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 FDPSP14324 419 aaKnown RBP11.89□□□□□ -0.51
CCDC18-208ENST00000479653 CDC25AP30304 524 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 PPP3CCP48454 512 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 TPMTP51580 245 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 IFRD2Q12894 506 aaPredicted RBP11.89□□□□□ -0.51
CCDC18-208ENST00000479653 STARD3Q14849 445 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 ZRSR1Q15695 479 aaKnown RBP11.89□□□□□ -0.51
CCDC18-208ENST00000479653 TBC1D25Q3MII6 688 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 FUT11Q495W5 492 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 C4orf50Q6ZRC1 276 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 METTL3Q86U44 580 aaKnown RBP11.89□□□□□ -0.51
CCDC18-208ENST00000479653 FAM124AQ86V42 546 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 ERICH1Q86X53 443 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 ZNF248Q8NDW4 579 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 IGSF8Q969P0 613 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 OTUB2Q96DC9 234 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 MED8Q96G25 268 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 SPATA17Q96L03 361 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 ZNF560Q96MR9 790 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
CCDC18-208ENST00000479653 PKMYT1Q99640 499 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 NUP58Q9BVL2 599 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 TIPINQ9BVW5 301 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 EHD2Q9NZN4 543 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 USP36Q9P275 1121 aaKnown RBP11.89□□□□□ -0.51
CCDC18-208ENST00000479653 C2CD2Q9Y426 696 aa11.89□□□□□ -0.51
CCDC18-208ENST00000479653 SLCO1B1Q9Y6L6 691 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms