RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 FAM193AP78312 1265 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 SRSF1Q07955 248 aaKnown RBP eCLIP4.06□□□□□ -1.76
CLOCK-204ENST00000479384 HDAC1Q13547 482 aaPredicted RBP4.06□□□□□ -1.76
CLOCK-204ENST00000479384 KHDC1LQ5JSQ8 128 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 RNF220Q5VTB9 566 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 IZUMO1Q8IYV9 350 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 KIAA0319LQ8IZA0 1049 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 PJA1Q8NG27 643 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 PLBD2Q8NHP8 589 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 OSR1Q8TAX0 266 aaPredicted RBP4.06□□□□□ -1.76
CLOCK-204ENST00000479384 PNISRQ8TF01 805 aaKnown RBP4.06□□□□□ -1.76
CLOCK-204ENST00000479384 SIGLEC11Q96RL6 698 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 DDX21Q9NR30 783 aaKnown RBP eCLIP4.06□□□□□ -1.76
CLOCK-204ENST00000479384 STAP2Q9UGK3 403 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 L1RE1Q9UN81 338 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 SNX14Q9Y5W7 946 aa4.06□□□□□ -1.76
CLOCK-204ENST00000479384 BTBD19C9JJ37 291 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 APAF1O14727 1248 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 MGEA5O60502 916 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 FGAP02671 866 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 PHKG2P15735 406 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 HTR6P50406 440 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 UCP3P55916 312 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 SATB1Q01826 763 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 ZNF91Q05481 1191 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 PICALMQ13492 652 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 UBE4AQ14139 1066 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 CNN3Q15417 329 aaKnown RBP4.05□□□□□ -1.76
CLOCK-204ENST00000479384 SYCP2LQ5T4T6 812 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 CYB5RLQ6IPT4 315 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 C9orf47Q6ZRZ4 202 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 MAEAQ7L5Y9 396 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 SFTPA1Q8IWL2 248 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 ACRBPQ8NEB7 543 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 MAP4K1Q92918 833 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 CCDC17Q96LX7 622 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 MESP1Q9BRJ9 268 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 SARS2Q9NP81 518 aaKnown RBP4.05□□□□□ -1.76
CLOCK-204ENST00000479384 CNNM1Q9NRU3 951 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 CPA4Q9UI42 421 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 AMFRQ9UKV5 643 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 TMX2Q9Y320 296 aa4.05□□□□□ -1.76
CLOCK-204ENST00000479384 ZMYM2Q9UBW7 1377 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 A0A1W2PPL8 197 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 FAM90A8PA6NJQ4 464 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 PQBP1O60828 265 aaKnown RBP4.04□□□□□ -1.76
CLOCK-204ENST00000479384 TOMM40O96008 361 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 FAM90A13PP0C7W8 464 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 FAM90A24PP0C7X0 464 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 CYP19A1P11511 503 aaPredicted RBP4.04□□□□□ -1.76
CLOCK-204ENST00000479384 KCNA3P22001 575 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 PEX2P28328 305 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 THBS4P35443 961 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 SLC11A2P49281 568 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 DGKEP52429 567 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 KRT17Q04695 432 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 AWAT1Q58HT5 328 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 IL31Q6EBC2 164 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 COL23A1Q86Y22 540 aaPredicted RBP4.04□□□□□ -1.76
CLOCK-204ENST00000479384 SIRT6Q8N6T7 355 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 LRTOMTQ8WZ04 291 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 RSPRY1Q96DX4 576 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 LYZL4Q96KX0 146 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 NT5C1BQ96P26 610 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 TRMT13Q9NUP7 481 aaKnown RBP4.04□□□□□ -1.76
CLOCK-204ENST00000479384 TMEM184CQ9NVA4 438 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 PI4KBQ9UBF8 816 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 HEY2Q9UBP5 337 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 TPCN1Q9ULQ1 816 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 MED16Q9Y2X0 877 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 PCDHGB6Q9Y5F9 930 aa4.04□□□□□ -1.76
CLOCK-204ENST00000479384 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.04□□□□□ -1.76
CLOCK-204ENST00000479384 ANO9A1A5B4 782 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 PHGDHO43175 533 aaKnown RBP4.03□□□□□ -1.76
CLOCK-204ENST00000479384 TLR2O60603 784 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 PEX14O75381 377 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 MT-CO3P00414 261 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 PSG1P11464 419 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 CYP2C9P11712 490 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 NEK3P51956 506 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 WNT3P56703 355 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 SEMA5AQ13591 1074 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 ERV3-1Q14264 604 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 SEMA3AQ14563 771 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 SEC23BQ15437 767 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 SWSAP1Q6NVH7 229 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 DLK2Q6UY11 383 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 DEF8Q6ZN54 512 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 C11orf96Q7Z7L8 435 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 ZNF548Q8NEK5 533 aaPredicted RBP4.03□□□□□ -1.76
CLOCK-204ENST00000479384 TMEM171Q8WVE6 324 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 APOL5Q9BWW9 433 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 NUP62CLQ9H1M0 184 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 ZMAT3Q9HA38 289 aaKnown RBP4.03□□□□□ -1.76
CLOCK-204ENST00000479384 CHST12Q9NRB3 414 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 POT1Q9NUX5 634 aa4.03□□□□□ -1.76
CLOCK-204ENST00000479384 H3BNX3 289 aa4.02□□□□□ -1.77
CLOCK-204ENST00000479384 CES2O00748 559 aa4.02□□□□□ -1.77
CLOCK-204ENST00000479384 PMM2O15305 246 aa4.02□□□□□ -1.77
CLOCK-204ENST00000479384 CNOT3O75175 753 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms