RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 PCGF5Q86SE9 256 aa17.97■□□□□ 0.47
LINC00336-201ENST00000477984 STK32AQ8WU08 396 aa17.97■□□□□ 0.47
LINC00336-201ENST00000477984 ZWILCHQ9H900 591 aa17.97■□□□□ 0.47
LINC00336-201ENST00000477984 PCDH9Q9HC56 1237 aa17.97■□□□□ 0.47
LINC00336-201ENST00000477984 PSMC3IPQ9P2W1 217 aaPredicted RBP17.97■□□□□ 0.47
LINC00336-201ENST00000477984 TUBGCP4Q9UGJ1 667 aa17.97■□□□□ 0.47
LINC00336-201ENST00000477984 T-ENOLP0DO92 83 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 PECAM1P16284 738 aaPredicted RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 TSHRP16473 764 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 PCK1P35558 622 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 TAF1CQ15572 869 aaPredicted RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 FAM102AQ5T9C2 384 aaPredicted RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 CENPUQ71F23 418 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 APLFQ8IW19 511 aaPredicted RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 DNAJB3Q8WWF6 145 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 LENG1Q96BZ8 264 aaPredicted RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 TSPAN18Q96SJ8 248 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 ASNSD1Q9NWL6 643 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 ZNF148Q9UQR1 794 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 PPEF2O14830 753 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 LMNAP02545 664 aaKnown RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 PFKMP08237 780 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 SETSIPP0DME0 302 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 KDELR1P24390 212 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 ZNF143P52747 638 aaPredicted RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 PKN2Q16513 984 aaKnown RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 GOLGA7BQ2TAP0 167 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 C17orf99Q6UX52 265 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 DPH6Q7L8W6 267 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 TTC13Q8NBP0 860 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 CMASQ8NFW8 434 aaPredicted RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 SLC35B2Q8TB61 432 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 MRPL45Q9BRJ2 306 aaKnown RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 TUBB6Q9BUF5 446 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 UBQLN1Q9UMX0 589 aaKnown RBP17.96■□□□□ 0.47
LINC00336-201ENST00000477984 SNX9Q9Y5X1 595 aa17.96■□□□□ 0.47
LINC00336-201ENST00000477984 SMAPO00193 183 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 RNF8O76064 485 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 RECQL4O94761 1208 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 IGHA2P01877 340 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 PAX7P23759 505 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 RGS2P41220 211 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 SNX17Q15036 470 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 CCL14Q16627 93 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 PKDCCQ504Y2 493 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 C9orf57Q5W0N0 161 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 BBS12Q6ZW61 710 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 UNC93AQ86WB7 457 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 FAM13CQ8NE31 585 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 PPP1R13LQ8WUF5 828 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 ALKBH8Q96BT7 664 aaKnown RBP17.95■□□□□ 0.46
LINC00336-201ENST00000477984 NAF1Q96HR8 494 aaKnown RBP17.95■□□□□ 0.46
LINC00336-201ENST00000477984 DHRS4Q9BTZ2 278 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 KATNAL1Q9BW62 490 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 AP5M1Q9H0R1 490 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 NXF3Q9H4D5 531 aaKnown RBP17.95■□□□□ 0.46
LINC00336-201ENST00000477984 GRID1Q9ULK0 1009 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 HES2Q9Y543 173 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 CITO14578 2027 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 A6NHS1 94 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 SPAG7O75391 227 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 TRUB2O95900 331 aaKnown RBP17.95■□□□□ 0.46
LINC00336-201ENST00000477984 MYL3P08590 195 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 TPBGLP0DKB5 382 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 KRT15P19012 456 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 GPD1P21695 349 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 PTPN4P29074 926 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 MIPP30301 263 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 GCKP35557 465 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 ARSEP51690 589 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 SMTNL2Q2TAL5 461 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 FAM183BPQ6ZVS7 135 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 C18orf25Q96B23 403 aaPredicted RBP17.95■□□□□ 0.46
LINC00336-201ENST00000477984 CNPY3Q9BT09 278 aa17.95■□□□□ 0.46
LINC00336-201ENST00000477984 KAT6AQ92794 2004 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 CCDC189A1A4V9 331 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 C2CD4BA6NLJ0 364 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 E5RJQ4 531 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 TM9SF1O15321 606 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 TREHO43280 583 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
LINC00336-201ENST00000477984 CD4P01730 458 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 CA4P22748 312 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 RPA3P35244 121 aaPredicted RBP17.94■□□□□ 0.46
LINC00336-201ENST00000477984 ZNF157P51786 506 aaPredicted RBP17.94■□□□□ 0.46
LINC00336-201ENST00000477984 XKR4Q5GH76 650 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 PPP1R26Q5T8A7 1209 aaPredicted RBP17.94■□□□□ 0.46
LINC00336-201ENST00000477984 HHATQ5VTY9 493 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 OR6B2Q6IFH4 312 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 PRUNE1Q86TP1 453 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 C12orf29Q8N999 325 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 TMEM40Q8WWA1 233 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 ZNF75CPQ92670 426 aaPredicted RBP17.94■□□□□ 0.46
LINC00336-201ENST00000477984 APBA2Q99767 749 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 TBC1D10AQ9BXI6 508 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 GPBP1L1Q9HC44 474 aaPredicted RBP17.94■□□□□ 0.46
LINC00336-201ENST00000477984 USP18Q9UMW8 372 aa17.94■□□□□ 0.46
LINC00336-201ENST00000477984 PIN4Q9Y237 131 aaKnown RBP17.94■□□□□ 0.46
LINC00336-201ENST00000477984 FARP1Q9Y4F1 1045 aaPredicted RBP17.94■□□□□ 0.46
LINC00336-201ENST00000477984 HOXC8P31273 242 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms