RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PRO3102Q9H379 93 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 RSAD1Q9HA92 442 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 CNOT7Q9UIV1 285 aaKnown RBP5.69□□□□□ -1.5
VPS50-214ENST00000477935 PCDHA6Q9UN73 950 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.69□□□□□ -1.5
VPS50-214ENST00000477935 TRIM17Q9Y577 477 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 UNC80Q8N2C7 3258 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 SALL3Q9BXA9 1300 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 VCANP13611 3396 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 NPC1L1Q9UHC9 1359 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 PPIP5K2O43314 1243 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 VPS4BO75351 444 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 U2AF1L5P0DN76 240 aaPredicted RBP5.68□□□□□ -1.5
VPS50-214ENST00000477935 PLA2G5P39877 138 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 NPTX2P47972 431 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 SOX8P57073 446 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 U2AF1Q01081 240 aaKnown RBP eCLIP5.68□□□□□ -1.5
VPS50-214ENST00000477935 ARHGEF6Q15052 776 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 SMN1Q16637 294 aaKnown RBP5.68□□□□□ -1.5
VPS50-214ENST00000477935 NXNQ6DKJ4 435 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 DAAM2Q86T65 1068 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 RASAL3Q86YV0 1011 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 TCEAL8Q8IYN2 117 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 PSD4Q8NDX1 1056 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 LPIN2Q92539 896 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 SLC9A6Q92581 669 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 SMOC2Q9H3U7 446 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 SARS2Q9NP81 518 aaKnown RBP5.68□□□□□ -1.5
VPS50-214ENST00000477935 STAP2Q9UGK3 403 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 TCEAL9Q9UHQ7 104 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 FNDC1Q4ZHG4 1894 aaPredicted RBP5.68□□□□□ -1.5
VPS50-214ENST00000477935 AKAP11Q9UKA4 1901 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 LAMA3Q16787 3333 aa5.68□□□□□ -1.5
VPS50-214ENST00000477935 YY2O15391 372 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 SUV39H1O43463 412 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 PROM1O43490 865 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 PEX1O43933 1283 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 MYBP10242 640 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 PPP3CBP16298 524 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 CHRM3P20309 590 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 TOB1P50616 345 aaPredicted RBP5.67□□□□□ -1.5
VPS50-214ENST00000477935 FGL2Q14314 439 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 MINDY4Q4G0A6 757 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 TAF2Q6P1X5 1199 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 VWA1Q6PCB0 445 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 MAGEB6Q8N7X4 407 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 PCSK9Q8NBP7 692 aaKnown RBP5.67□□□□□ -1.5
VPS50-214ENST00000477935 FAM46DQ8NEK8 389 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 RUNDC1Q96C34 613 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 FAM122AQ96E09 287 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 ERO1AQ96HE7 468 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 SYNPO2LQ9H987 977 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 LRIT1Q9P2V4 623 aa5.67□□□□□ -1.5
VPS50-214ENST00000477935 F5H697 171 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 CTNND1O60716 968 aaKnown RBP5.66□□□□□ -1.5
VPS50-214ENST00000477935 DNAJB5O75953 348 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 CAMTA2O94983 1202 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 PIM1P11309 404 aaPredicted RBP5.66□□□□□ -1.5
VPS50-214ENST00000477935 BMP5P22003 454 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 CXCR5P32302 372 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 FOLR3P41439 243 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 KCNJ5P48544 419 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 NDUFV1P49821 464 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 EIF4A2Q14240 407 aaKnown RBP5.66□□□□□ -1.5
VPS50-214ENST00000477935 ERCC6LQ2NKX8 1250 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 SLC4A8Q2Y0W8 1093 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 CRY2Q49AN0 593 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 ANO6Q4KMQ2 910 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 KIAA0895LQ68EN5 471 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 TSHZ1Q6ZSZ6 1077 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 OVCH2Q7RTZ1 564 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 TTC5Q8N0Z6 440 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 DEFB123Q8N688 67 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 MYCBPAPQ8TBZ2 947 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 ZNF333Q96JL9 665 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 CRAMP1Q96RY5 1269 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 HTATIP2Q9BUP3 242 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 CPA4Q9UI42 421 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 KIF7Q2M1P5 1343 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 CENPFP49454 3210 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 TTC28Q96AY4 2481 aa5.66□□□□□ -1.5
VPS50-214ENST00000477935 SNED1Q8TER0 1413 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 A0A0B4J269 797 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 KIAA0355O15063 1070 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 MPPED1O15442 326 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 TSPAN6O43657 245 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 TUSC2O75896 110 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 SOAT2O75908 522 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 UNC5CO95185 931 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 ITGALP20701 1170 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 RPS12P25398 132 aaKnown RBP5.65□□□□□ -1.5
VPS50-214ENST00000477935 AGFG1P52594 562 aaKnown RBP5.65□□□□□ -1.5
VPS50-214ENST00000477935 SIM1P81133 766 aaPredicted RBP5.65□□□□□ -1.5
VPS50-214ENST00000477935 MRPS35P82673 323 aaKnown RBP5.65□□□□□ -1.5
VPS50-214ENST00000477935 SLC39A6Q13433 755 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 TUBB3Q13509 450 aa5.65□□□□□ -1.5
VPS50-214ENST00000477935 BOP1Q14137 746 aaKnown RBP5.65□□□□□ -1.5
VPS50-214ENST00000477935 ZNF169Q14929 603 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms