RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 MRGPRX1Q96LB2 322 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 USP28Q96RU2 1077 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 TMEM60Q9H2L4 133 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 GDPD2Q9HCC8 539 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 CD248Q9HCU0 757 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 WSB2Q9NYS7 404 aaPredicted RBP10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 DEC1Q9P2X7 70 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 EIF2B4Q9UI10 523 aaKnown RBP10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 SNX11Q9Y5W9 270 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 CPQQ9Y646 472 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 KNTC1P50748 2209 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 TMEM131Q92545 1883 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 TEP1Q99973 2627 aaKnown RBP10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 TRIM66O15016 1216 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 TRIM24O15164 1050 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 TULP3O75386 442 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 YEATS4O95619 227 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 BMP15O95972 392 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 SCN1AP35498 2009 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 NASPP49321 788 aaPredicted RBP10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 IL9RQ01113 521 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 CEBPZQ03701 1054 aaKnown RBP10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 STK38Q15208 465 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 ENOX2Q16206 610 aaKnown RBP10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 ECM1Q16610 540 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 TTC38Q5R3I4 469 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 HES3Q5TGS1 186 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 ERICH1Q86X53 443 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 TERB1Q8NA31 727 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 CADM4Q8NFZ8 388 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 TTC9Q92623 222 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 MED8Q96G25 268 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 RNF38Q9H0F5 515 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 CFAP97Q9P2B7 532 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 STARD13Q9Y3M8 1113 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 PCDHGA1Q9Y5H4 931 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 MYLKQ15746 1914 aa10.37□□□□□ -0.75
SMARCB1-206ENST00000477836 MYO9AB2RTY4 2548 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 ANO9A1A5B4 782 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 SFI1A8K8P3 1242 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 METTL12A8MUP2 240 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 RFPL3O75679 317 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 ABL1P00519 1130 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 ACAT1P24752 427 aaKnown RBP10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 TAF6P49848 677 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 CCT8P50990 548 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 AFF3P51826 1226 aaKnown RBP10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 UCNP55089 124 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 SLC7A9P82251 487 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 DNAJC3Q13217 504 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 PDIA5Q14554 519 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 INAVAQ3KP66 663 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 TBC1D25Q3MII6 688 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 ZPBP2Q6X784 338 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 ETFBKMTQ8IXQ9 262 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 KIAA1958Q8N8K9 716 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 ZNF248Q8NDW4 579 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 SNX19Q92543 992 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 BICD1Q96G01 975 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 TSPAN18Q96SJ8 248 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 GABRG3Q99928 467 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 FAM117AQ9C073 453 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 ABCB6Q9NP58 842 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 ANKMY1Q9P2S6 941 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 TFIP11Q9UBB9 837 aaKnown RBP10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 GTF3C4Q9UKN8 822 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 PCDHB6Q9Y5E3 794 aa10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 HEMK1Q9Y5R4 338 aaPredicted RBP10.36□□□□□ -0.75
SMARCB1-206ENST00000477836 FLNCQ14315 2725 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 E2F8A0AVK6 867 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 GOLGA6L4A6NEF3 574 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 KCNJ18B7U540 433 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 WASH3PC4AMC7 463 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 H0Y8X5 98 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 CBX4O00257 560 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 ENC1O14682 589 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 PCDHGA12O60330 932 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 MBD3O95983 291 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 PFKLP17858 780 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 CCT6AP40227 531 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 ME1P48163 572 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 TOB1P50616 345 aaPredicted RBP10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 TMEM132DQ14C87 1099 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 CCDC142Q17RM4 750 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 ANO4Q32M45 955 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 HAUS3Q68CZ6 603 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 SPATA2LQ8IUW3 424 aaPredicted RBP10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 KRI1Q8N9T8 703 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 C1orf216Q8TAB5 229 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 IGSF8Q969P0 613 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 ITM2CQ9NQX7 267 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 DDX19AQ9NUU7 478 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 USP36Q9P275 1121 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 TBC1D14Q9P2M4 693 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 KIAA1024Q9UPX6 916 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 ANKRD6Q9Y2G4 727 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 CLIC4Q9Y696 253 aa10.35□□□□□ -0.75
SMARCB1-206ENST00000477836 SLCO1B1Q9Y6L6 691 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms