RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 KBTBD13C9JR72 458 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 CASQ2O14958 399 aaPredicted RBP13.95□□□□□ -0.18
DFFB-209ENST00000477548 DENRO43583 198 aaKnown RBP13.95□□□□□ -0.18
DFFB-209ENST00000477548 ADCY3O60266 1144 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 DKC1O60832 514 aaKnown RBP eCLIP13.95□□□□□ -0.18
DFFB-209ENST00000477548 SRGAP2CP0DJJ0 459 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 SRGAP2BP0DMP2 458 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 SLC5A2P31639 672 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 RPL22P35268 128 aaKnown RBP13.95□□□□□ -0.18
DFFB-209ENST00000477548 RPL7AP62424 266 aaKnown RBP13.95□□□□□ -0.18
DFFB-209ENST00000477548 TTC39BQ5VTQ0 682 aaPredicted RBP13.95□□□□□ -0.18
DFFB-209ENST00000477548 ENOSF1Q7L5Y1 443 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 TRMT1LQ7Z2T5 733 aaKnown RBP13.95□□□□□ -0.18
DFFB-209ENST00000477548 IGDCC3Q8IVU1 814 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 RTKN2Q8IZC4 609 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 PPM1NQ8N819 430 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 FAM84AQ96KN4 292 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 PCDHGB4Q9UN71 923 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 SORCS3Q9UPU3 1222 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 PCDHGB5Q9Y5G0 923 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 ZHX2Q9Y6X8 837 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 ADAMTSL1Q8N6G6 1762 aa13.95□□□□□ -0.18
DFFB-209ENST00000477548 MYOCOSA0A1B0GUC4 107 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 KLRG2A4D1S0 409 aaPredicted RBP13.94□□□□□ -0.18
DFFB-209ENST00000477548 TMEM221A6NGB7 291 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 DNAJA2O60884 412 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 CFBP00751 764 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 HLA-DOAP06340 250 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 GCNT1Q02742 428 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 LPIN1Q14693 890 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 PLEKHA7Q6IQ23 1121 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 ZCCHC23Q6ZST2 131 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 DEFB107AQ8IZN7 70 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SH2D3AQ9BRG2 576 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 WDR11Q9BZH6 1224 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SENP6Q9GZR1 1112 aaPredicted RBP13.94□□□□□ -0.18
DFFB-209ENST00000477548 PCDH18Q9HCL0 1135 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 PARVAQ9NVD7 372 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SF3B1O75533 1304 aaKnown RBP eCLIP13.94□□□□□ -0.182e-7■■■■■ 129.2
DFFB-209ENST00000477548 KRT37O76014 449 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 KLHL2O95198 593 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 POLR2MP0CAP2 368 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 GJA8P48165 433 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 PEX3P56589 373 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 WASHC5Q12768 1159 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 STX3Q13277 289 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 TEX44Q53QW1 395 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 OGFRL1Q5TC84 451 aaPredicted RBP13.94□□□□□ -0.18
DFFB-209ENST00000477548 PAOXQ6QHF9 649 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 WDR75Q8IWA0 830 aaKnown RBP13.94□□□□□ -0.18
DFFB-209ENST00000477548 FNDC8Q8TC99 324 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 C20orf27Q9GZN8 174 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 PLK2Q9NYY3 685 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SIRPGQ9P1W8 387 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SYNPO2Q9UMS6 1093 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 APOBEC2Q9Y235 224 aaKnown RBP13.94□□□□□ -0.18
DFFB-209ENST00000477548 H3BSA7 217 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 BOLA2-SMG1P6H3BVE0 249 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 TRPA1O75762 1119 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 MAPTP10636 758 aaKnown RBP13.94□□□□□ -0.18
DFFB-209ENST00000477548 HDAC4P56524 1084 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 OTUD4Q01804 1114 aaKnown RBP13.94□□□□□ -0.18
DFFB-209ENST00000477548 CDK18Q07002 472 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SYCP2LQ5T4T6 812 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 TXNRD3NBQ6F5E7 133 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 PGM2L1Q6PCE3 622 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SLC26A11Q86WA9 606 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 CCDC33Q8N5R6 958 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SLC35B2Q8TB61 432 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 ACTL9Q8TC94 416 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 ACTRT2Q8TDY3 377 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 DDI1Q8WTU0 396 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 CFAP36Q96G28 342 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 TEKT3Q9BXF9 490 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 ZC3H12CQ9C0D7 883 aaKnown RBP13.94□□□□□ -0.18
DFFB-209ENST00000477548 NACA2Q9H009 215 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 SPATA7Q9P0W8 599 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 ZNRF3Q9ULT6 936 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 AP4B1Q9Y6B7 739 aa13.94□□□□□ -0.18
DFFB-209ENST00000477548 ANKRD31Q8N7Z5 1873 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 F8VP50 259 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 TOM1L1O75674 476 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 CRTAMO95727 393 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 SNRPAP09012 282 aaKnown RBP13.93□□□□□ -0.18
DFFB-209ENST00000477548 TSHRP16473 764 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 NOMO3P69849 1222 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 TCP10Q12799 353 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 USP37Q86T82 979 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 SP8Q8IXZ3 490 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 TMEM174Q8WUU8 243 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 XAB2Q9HCS7 855 aaKnown RBP13.93□□□□□ -0.18
DFFB-209ENST00000477548 PKD2L1Q9P0L9 805 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 AK5Q9Y6K8 562 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 LOC100653049A0A140TA62 436 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 H3BNX3 289 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 CSDE1O75534 798 aaKnown RBP13.93□□□□□ -0.18
DFFB-209ENST00000477548 KRT34O76011 436 aa13.93□□□□□ -0.18
DFFB-209ENST00000477548 VIL1P09327 827 aaKnown RBP13.93□□□□□ -0.18
DFFB-209ENST00000477548 CDKN2BP42772 138 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms