RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CYP11A1P05108 521 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 HOXB2P14652 356 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 JUPP14923 745 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 TCF3P15923 654 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 NDUFV2P19404 249 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 EIF2DP41214 584 aaKnown RBP15.02■□□□□ -0
ATG9A-220ENST00000475339 SMARCB1Q12824 385 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 KCNB1Q14721 858 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 NOLC1Q14978 699 aaKnown RBP eCLIP15.02■□□□□ -0
ATG9A-220ENST00000475339 DDR2Q16832 855 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 PREPLQ4J6C6 727 aaPredicted RBP15.02■□□□□ -0
ATG9A-220ENST00000475339 COLEC12Q5KU26 742 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 C6orf118Q5T5N4 469 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 SFR1Q86XK3 245 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 CEP57L1Q8IYX8 460 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 ZNF513Q8N8E2 541 aaPredicted RBP15.02■□□□□ -0
ATG9A-220ENST00000475339 SNIP1Q8TAD8 396 aaKnown RBP15.02■□□□□ -0
ATG9A-220ENST00000475339 WBP1Q96G27 269 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 MIR1-1HGQ9H1L0 117 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 TMLHEQ9NVH6 421 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 SEL1LQ9UBV2 794 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 PCDHB5Q9Y5E4 795 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 PCDHGB2Q9Y5G2 931 aa15.02■□□□□ -0
ATG9A-220ENST00000475339 MYOFQ9NZM1 2061 aa15.02□□□□□ -0.01
ATG9A-220ENST00000475339 NOTCH2Q04721 2471 aa15.02□□□□□ -0.01
ATG9A-220ENST00000475339 TBC1D3BA6NDS4 549 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 LEFTY2O00292 366 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 HNRNPDLO14979 420 aaKnown RBP15.01□□□□□ -0.01
ATG9A-220ENST00000475339 ZBTB24O43167 697 aaPredicted RBP15.01□□□□□ -0.01
ATG9A-220ENST00000475339 TOM1L1O75674 476 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 NOL4O94818 638 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 KRT10P13645 584 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 C6P13671 934 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 IL12RB1P42701 662 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 LIG4P49917 911 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 CSRP3P50461 194 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 ASIC1P78348 528 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 CCDC173Q0VFZ6 552 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 E2F4Q16254 413 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 ADALQ6DHV7 355 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 RHBDF2Q6PJF5 856 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 IL27RAQ6UWB1 636 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 ZPBP2Q6X784 338 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 SPACA3Q8IXA5 215 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 CCDC65Q8IXS2 484 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 THEM5Q8N1Q8 247 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 DNASE2BQ8WZ79 361 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 TRMT2BQ96GJ1 504 aaKnown RBP15.01□□□□□ -0.01
ATG9A-220ENST00000475339 MYRFLQ96LU7 910 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 SLC6A17Q9H1V8 727 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 MRPL44Q9H9J2 332 aaKnown RBP15.01□□□□□ -0.01
ATG9A-220ENST00000475339 GDPD2Q9HCC8 539 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 GMIPQ9P107 970 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 HCN2Q9UL51 889 aa15.01□□□□□ -0.01
ATG9A-220ENST00000475339 GOLGA6L4A6NEF3 574 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 MEI4A8MW99 385 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 LACTBL1A8MY62 500 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 PFKFB1P16118 471 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 CMA1P23946 247 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 TNFSF9P41273 254 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 SUZ12Q15022 739 aaKnown RBP15□□□□□ -0.01
ATG9A-220ENST00000475339 WSCD1Q658N2 575 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 TRMT11Q7Z4G4 463 aaKnown RBP15□□□□□ -0.01
ATG9A-220ENST00000475339 METTL23Q86XA0 190 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 MIB1Q86YT6 1006 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 PHTF2Q8N3S3 785 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 FGF11Q92914 225 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 PANK4Q9NVE7 773 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 KBTBD4Q9NVX7 518 aa15□□□□□ -0.01
ATG9A-220ENST00000475339 GTF3C5Q9Y5Q8 519 aaPredicted RBP15□□□□□ -0.01
ATG9A-220ENST00000475339 TSC2P49815 1807 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 A0A1B0GVL5 298 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 CYB561D2O14569 222 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 BCAT2O15382 392 aaPredicted RBP14.99□□□□□ -0.01
ATG9A-220ENST00000475339 CLDN3O15551 220 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 GCNT3O95395 438 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 NFICP08651 508 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 CLTAP09496 248 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 RHDQ02161 417 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 PPP2R3AQ06190 1150 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 KCNH2Q12809 1159 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 C9orf57Q5W0N0 161 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 STXBP4Q6ZWJ1 553 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 DCP1BQ8IZD4 617 aaKnown RBP14.99□□□□□ -0.01
ATG9A-220ENST00000475339 FSIP1Q8NA03 581 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 KCNV2Q8TDN2 545 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 IPO4Q8TEX9 1081 aaKnown RBP14.99□□□□□ -0.01
ATG9A-220ENST00000475339 HVCN1Q96D96 273 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 DNAJC19Q96DA6 116 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 TRIM9Q9C026 710 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 HAPLN2Q9GZV7 340 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 CD248Q9HCU0 757 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 TBC1D7Q9P0N9 293 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 DSEQ9UL01 958 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 ANK1P16157 1881 aa14.99□□□□□ -0.01
ATG9A-220ENST00000475339 A0A1W2PQ27 194 aa14.98□□□□□ -0.01
ATG9A-220ENST00000475339 A0A1W2PQ64 194 aa14.98□□□□□ -0.01
ATG9A-220ENST00000475339 FRMD3A2A2Y4 597 aa14.98□□□□□ -0.01
ATG9A-220ENST00000475339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.98□□□□□ -0.01
ATG9A-220ENST00000475339 PIRO00625 290 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms