RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 KRT37O76014 449 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 TM7SF2O76062 418 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 RANBP1P43487 201 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 CDH8P55286 799 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 SLC25A3Q00325 362 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 ENPEPQ07075 957 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
TPR-205ENST00000474852 CDR2LQ86X02 465 aaPredicted RBP16.98■□□□□ 0.31
TPR-205ENST00000474852 RDM1Q8NG50 284 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 USP6NLQ92738 828 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 CCDC124Q96CT7 223 aaKnown RBP16.98■□□□□ 0.31
TPR-205ENST00000474852 TRAPPC9Q96Q05 1148 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 ECSITQ9BQ95 431 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 WWP1Q9H0M0 922 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 ASCC2Q9H1I8 757 aaPredicted RBP16.98■□□□□ 0.31
TPR-205ENST00000474852 RPAP3Q9H6T3 665 aaPredicted RBP16.98■□□□□ 0.31
TPR-205ENST00000474852 SMYD2Q9NRG4 433 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.98■□□□□ 0.31
TPR-205ENST00000474852 TAGLN3Q9UI15 199 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 PLA2G4CQ9UP65 541 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 HEY1Q9Y5J3 304 aa16.98■□□□□ 0.31
TPR-205ENST00000474852 SORBS2O94875 1100 aaKnown RBP16.97■□□□□ 0.31
TPR-205ENST00000474852 APRTP07741 180 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 SNRPAP09012 282 aaKnown RBP16.97■□□□□ 0.31
TPR-205ENST00000474852 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
TPR-205ENST00000474852 GSTT1P30711 240 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 CDH6P55285 790 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 AP2B1P63010 937 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 CDC16Q13042 620 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 PDCD2Q16342 344 aaPredicted RBP16.97■□□□□ 0.31
TPR-205ENST00000474852 ZNF699Q32M78 642 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
TPR-205ENST00000474852 THNSL1Q8IYQ7 743 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 CCDC33Q8N5R6 958 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 ITFG2Q969R8 447 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 GPRASP2Q96D09 838 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 MMP19Q99542 508 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 APOL6Q9BWW8 343 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 TTLL3Q9Y4R7 772 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 MAD1L1Q9Y6D9 718 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 KCNN4O15554 427 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 DKC1O60832 514 aaKnown RBP eCLIP16.97■□□□□ 0.31
TPR-205ENST00000474852 KRT19P08727 400 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 EPHB1P54762 984 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 ACTR3P61158 418 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 YWHAZP63104 245 aaKnown RBP16.97■□□□□ 0.31
TPR-205ENST00000474852 GHRHRQ02643 423 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 USP4Q13107 963 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 ABHD15Q6UXT9 468 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 NET1Q7Z628 596 aaPredicted RBP16.97■□□□□ 0.31
TPR-205ENST00000474852 CRLF3Q8IUI8 442 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 NDUFAF2Q8N183 169 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 SLC7A3Q8WY07 619 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 GORASP1Q9BQQ3 440 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 PORCNQ9H237 461 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 EBF3Q9H4W6 596 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 USP18Q9UMW8 372 aa16.97■□□□□ 0.31
TPR-205ENST00000474852 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
TPR-205ENST00000474852 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 RNASEH1O60930 286 aaKnown RBP16.96■□□□□ 0.31
TPR-205ENST00000474852 LYPLA1O75608 230 aaPredicted RBP16.96■□□□□ 0.31
TPR-205ENST00000474852 TOM1L1O75674 476 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 GRAP2O75791 330 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 ERBB2P04626 1255 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 C6orf222P0C671 652 aaPredicted RBP16.96■□□□□ 0.31
TPR-205ENST00000474852 CSH1P0DML2 217 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 CSH2P0DML3 217 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 KCNJ11Q14654 390 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 TRMT5Q32P41 509 aaKnown RBP16.96■□□□□ 0.31
TPR-205ENST00000474852 ATG16L1Q676U5 607 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 PDP2Q9P2J9 529 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 ADGRA2Q96PE1 1338 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 F5H423 210 aaPredicted RBP16.96■□□□□ 0.31
TPR-205ENST00000474852 F8W8V4 182 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 POLR2BP30876 1174 aaKnown RBP16.96■□□□□ 0.31
TPR-205ENST00000474852 SP2Q02086 613 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 TRMT10BQ6PF06 316 aaKnown RBP16.96■□□□□ 0.31
TPR-205ENST00000474852 EFCAB3Q8N7B9 438 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 TTLL6Q8N841 843 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 PPP1R14CQ8TAE6 165 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 C7orf26Q96N11 449 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 PEBP4Q96S96 227 aa16.96■□□□□ 0.31
TPR-205ENST00000474852 RFPL1O75677 317 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 PDE5AO76074 875 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 NAMPTP43490 491 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 RALGPS1Q5JS13 557 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 LPCAT4Q643R3 524 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 SNRNP48Q6IEG0 339 aaKnown RBP16.95■□□□□ 0.3
TPR-205ENST00000474852 MYLK4Q86YV6 388 aaPredicted RBP16.95■□□□□ 0.3
TPR-205ENST00000474852 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.95■□□□□ 0.3
TPR-205ENST00000474852 ZNF518BQ9C0D4 1074 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 CYP4F11Q9HBI6 524 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 GPATCH2LQ9NWQ4 482 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 EFR3BQ9Y2G0 817 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 HBS1LQ9Y450 684 aaKnown RBP16.95■□□□□ 0.3
TPR-205ENST00000474852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.95■□□□□ 0.3
TPR-205ENST00000474852 KLF11O14901 512 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 PDE1BQ01064 536 aa16.95■□□□□ 0.3
TPR-205ENST00000474852 CAPSQ13938 189 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms