RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 STRADAQ7RTN6 431 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 PHLDB2Q86SQ0 1253 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CTAGE6Q86UF2 777 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 VSIG1Q86XK7 387 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 SCUBE3Q8IX30 993 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CTAGE4Q8IX94 777 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 RHOT1Q8IXI2 618 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 DCP1BQ8IZD4 617 aaKnown RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 UBL4BQ8N7F7 174 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CMASQ8NFW8 434 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 EXD1Q8NHP7 514 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 FAM71BQ8TC56 605 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 HASPINQ8TF76 798 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 BADQ92934 168 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 PGAP3Q96FM1 320 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 C8orf48Q96LL4 319 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 LBHD1Q9BQE6 289 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 TTPALQ9BTX7 342 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 HERC2P3Q9BVR0 1158 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 SYNCQ9H7C4 482 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 DMAP1Q9NPF5 467 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 PRDM5Q9NQX1 630 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 METTL5Q9NRN9 209 aaKnown RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 KRT82Q9NSB4 513 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 COMMD8Q9NX08 183 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 ZMYND8Q9ULU4 1186 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 MYH10P35580 1976 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 C3orf70A6NLC5 250 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF487B1APH4 448 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 GOLGA8SH3BPF8 625 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 PGRMC1O00264 195 aaKnown RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SPOPO43791 374 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 HSF2BPO75031 334 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 DAB1O75553 588 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 ABLIM3O94929 683 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 UPP2O95045 317 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 VNN2O95498 520 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SOD2P04179 222 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 ACRP10323 421 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 PYGMP11217 842 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 PDGFRAP16234 1089 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SYN1P17600 705 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 BDNFP23560 247 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 NOS2P35228 1153 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 MATKP42679 507 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 PAFAH1B1P43034 410 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 MAP3K7CLP57077 242 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 YWHAZP63104 245 aaKnown RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 DSG1Q02413 1049 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 KLF1Q13351 362 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SIX1Q15475 284 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 TAF5Q15542 800 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 PPP2R5EQ16537 467 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 CYP1B1Q16678 543 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 FAM102AQ5T9C2 384 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 TAS1R1Q7RTX1 841 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 GPRIN1Q7Z2K8 1008 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 DDX53Q86TM3 631 aaKnown RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SLC13A5Q86YT5 568 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 PSTKQ8IV42 348 aaKnown RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 ZDHHC14Q8IZN3 488 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 EMC1Q8N766 993 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 COLGALT1Q8NBJ5 622 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SPPL2BQ8TCT7 592 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 TEKT4Q8WW24 435 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 RXFP2Q8WXD0 754 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 RUBCNQ92622 972 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 GOLGA1Q92805 767 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 MS4A14Q96JA4 679 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SPATA17Q96L03 361 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 RNPC3Q96LT9 517 aaKnown RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF558Q96NG5 402 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 KCNK16Q96T55 309 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SLC9A7Q96T83 725 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 TBCBQ99426 244 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 NAP1L3Q99457 506 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 NPY6RQ99463 290 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 GDF15Q99988 308 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 UBE2OQ9C0C9 1292 aaKnown RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 LRRC4Q9HBW1 653 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 RXFP1Q9HBX9 757 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 ST7Q9NRC1 585 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 TMEM51Q9NW97 253 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 DDX56Q9NY93 547 aaKnown RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 RRN3Q9NYV6 651 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SPG21Q9NZD8 308 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 MAFFQ9ULX9 164 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 INSL6Q9Y581 213 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 PCDHB5Q9Y5E4 795 aa6.93□□□□□ -1.3
ATG4A-207ENST00000474825 MRPL42Q9Y6G3 142 aaKnown RBP6.93□□□□□ -1.3
ATG4A-207ENST00000474825 UQCRHLA0A096LP55 91 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 FAM170AA1A519 330 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 TARSL2A2RTX5 802 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 MTMR11A4FU01 709 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 TMEM110-MUSTN1A8MSY1 372 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 NT5C1B-RDH14C9J2C7 533 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 CCDC188H7C350 402 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 DYNC1I1O14576 645 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms