RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RNF38Q9H0F5 515 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 HSD3B7Q9H2F3 369 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 CCSER2Q9H7U1 834 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 TRPV5Q9NQA5 729 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 CNGB3Q9NQW8 809 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 GKN1Q9NS71 199 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 SMPD4Q9NXE4 827 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 LEFTY2O00292 366 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 TULP2O00295 520 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 MAN2B1O00754 1011 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 SLC9A3R1O14745 358 aaPredicted RBP14.45□□□□□ -0.1
USF1-205ENST00000473969 COCHO43405 550 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 FBXO21O94952 628 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 TCF3P15923 654 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 STAT1P42224 750 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 KLK7P49862 253 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 YWHAGP61981 247 aaKnown RBP eCLIP14.45□□□□□ -0.1
USF1-205ENST00000473969 AMPD2Q01433 879 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 NR1H3Q13133 447 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 PDGFRLQ15198 375 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 C10orf120Q5SQS8 335 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 BTBD8Q5XKL5 378 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 LRSAM1Q6UWE0 723 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 TPRG1Q6ZUI0 275 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 HFE2Q6ZVN8 426 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 FBXL6Q8N531 539 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 RNF139Q8WU17 664 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 ZSWIM1Q9BR11 485 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 LRFN3Q9BTN0 628 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 NAA15Q9BXJ9 866 aaKnown RBP14.45□□□□□ -0.1
USF1-205ENST00000473969 C8orf33Q9H7E9 229 aaPredicted RBP14.45□□□□□ -0.1
USF1-205ENST00000473969 NLRC4Q9NPP4 1024 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 RTN4Q9NQC3 1192 aaKnown RBP14.45□□□□□ -0.1
USF1-205ENST00000473969 HEBP1Q9NRV9 189 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 DUS2Q9NX74 493 aaKnown RBP14.45□□□□□ -0.1
USF1-205ENST00000473969 CLIC5Q9NZA1 410 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 DNMT3LQ9UJW3 386 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 AJAP1Q9UKB5 411 aaPredicted RBP14.45□□□□□ -0.1
USF1-205ENST00000473969 STRIP2Q9ULQ0 834 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 SIK3Q9Y2K2 1263 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 MRPS17Q9Y2R5 130 aaKnown RBP14.45□□□□□ -0.1
USF1-205ENST00000473969 SH3BP1Q9Y3L3 701 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 MYH10P35580 1976 aa14.45□□□□□ -0.1
USF1-205ENST00000473969 MUC3AQ02505 3323 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 F8VZ95 297 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 SART1O43290 800 aaKnown RBP14.44□□□□□ -0.1
USF1-205ENST00000473969 OLFM2O95897 454 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 CCDC172P0C7W6 258 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 PNMA6AP0CW24 399 aaPredicted RBP14.44□□□□□ -0.1
USF1-205ENST00000473969 GLULP15104 373 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 CLCN1P35523 988 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 GPD2P43304 727 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 USP4Q13107 963 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 ZNF77Q15935 545 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 PM20D1Q6GTS8 502 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 PMF1Q6P1K2 205 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 DENND1BQ6P3S1 775 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 C1orf228Q6PIY5 440 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 ZNF852Q6ZMS4 543 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 SLC47A2Q86VL8 602 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 FMNL3Q8IVF7 1028 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 STK32AQ8WU08 396 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 IRGQQ8WZA9 623 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 EXOC4Q96A65 974 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 ZFYVE19Q96K21 471 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 LRRC3BQ96PB8 259 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 GANQ9H2C0 597 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 SYNCQ9H7C4 482 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 TBC1D17Q9HA65 648 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 NMUR1Q9HB89 426 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 ACP6Q9NPH0 428 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 C11orf16Q9NQ32 467 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 CYLDQ9NQC7 956 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 OLA1Q9NTK5 396 aaKnown RBP14.44□□□□□ -0.1
USF1-205ENST00000473969 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.44□□□□□ -0.1
USF1-205ENST00000473969 CFAP97Q9P2B7 532 aa14.44□□□□□ -0.1
USF1-205ENST00000473969 LSM7Q9UK45 103 aaKnown RBP14.44□□□□□ -0.1
USF1-205ENST00000473969 KRBA1A5PL33 1030 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 PIK3R2O00459 728 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 NCAM2O15394 837 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 GFPT2O94808 682 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 TPM3P06753 285 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 CYP11B1P15538 503 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 SOX5P35711 763 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 UBASH3AP57075 661 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 FANCCQ00597 558 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 ITPRIPL2Q3MIP1 535 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 DPY19L2P1Q6NXN4 242 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 KLHDC10Q6PID8 442 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 APTXQ7Z2E3 356 aaKnown RBP14.43□□□□□ -0.1
USF1-205ENST00000473969 SCD5Q86SK9 330 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 PASD1Q8IV76 773 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 SCML4Q8N228 414 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 CPA6Q8N4T0 437 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 ZNF276Q8N554 614 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 KIAA1958Q8N8K9 716 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 TTC8Q8TAM2 541 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 OSCP1Q8WVF1 389 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 ATP2A3Q93084 1043 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 MSANTD3Q96H12 275 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms