RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 TRPC7Q9HCX4 862 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 METTL5Q9NRN9 209 aaKnown RBP11.05□□□□□ -0.64
UBE2F-220ENST00000472479 GMIPQ9P107 970 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 TJP2Q9UDY2 1190 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 SCML2Q9UQR0 700 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 MRPS23Q9Y3D9 190 aaKnown RBP11.05□□□□□ -0.64
UBE2F-220ENST00000472479 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBE2F-220ENST00000472479 A0A1W2PQH9 124 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 TMEM110-MUSTN1A8MSY1 372 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 TNFRSF10BO14763 440 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 KRT86O43790 486 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 LCA5LO95447 670 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 LTFP02788 710 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 TMEM253P0C7T8 217 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 NCAM1P13591 858 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 RARGP13631 454 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 CDC25CP30307 473 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 SSR1P43307 286 aaKnown RBP11.04□□□□□ -0.64
UBE2F-220ENST00000472479 GABRB2P47870 512 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 PPP3CCP48454 512 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 PSEN1P49768 467 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 VAV2P52735 878 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 DAOAP59103 153 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 YWHAZP63104 245 aaKnown RBP11.04□□□□□ -0.64
UBE2F-220ENST00000472479 RAB41Q5JT25 222 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 BSPRYQ5W0U4 402 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 LEMD2Q8NC56 503 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 VN1R2Q8NFZ6 395 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 FEZF2Q8TBJ5 459 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 CLEC4CQ8WTT0 213 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 EDEM1Q92611 657 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 RIPOR3Q96MK2 946 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 NUP85Q9BW27 656 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 TSGA10Q9BZW7 698 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 KCNF1Q9H3M0 494 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 ABCC13Q9NSE7 274 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 HCFC1R1Q9NWW0 138 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 TRMT1Q9NXH9 659 aaKnown RBP11.04□□□□□ -0.64
UBE2F-220ENST00000472479 INTUQ9ULD6 942 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 ADGRG1Q9Y653 693 aa11.04□□□□□ -0.64
UBE2F-220ENST00000472479 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 SYNJ2BP-COX16A0A087WUM0 186 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 A0A1W2PRU2 124 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 YJEFN3A6XGL0 299 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 E7ENQ6 273 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 MYO1FO00160 1098 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 ZNF263O14978 683 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 HSF2BPO75031 334 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 GJB6O95452 261 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 RHOP08100 348 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 GLI1P08151 1106 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 PDGFRAP16234 1089 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 SDC4P31431 198 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 NTHL1P78549 312 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 IFI16Q16666 785 aaKnown RBP11.03□□□□□ -0.64
UBE2F-220ENST00000472479 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 C10orf120Q5SQS8 335 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 HECTD3Q5T447 861 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 PM20D1Q6GTS8 502 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 TMEM184AQ6ZMB5 413 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 RHOT2Q8IXI1 618 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 DEFB106AQ8N104 65 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 C3orf20Q8ND61 904 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 RNF34Q969K3 372 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 PABPC5Q96DU9 382 aaKnown RBP11.03□□□□□ -0.64
UBE2F-220ENST00000472479 MCRS1Q96EZ8 462 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 MCEEQ96PE7 176 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 CDK5RAP1Q96SZ6 601 aaKnown RBP11.03□□□□□ -0.64
UBE2F-220ENST00000472479 POPDC2Q9HBU9 364 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 LZTFL1Q9NQ48 299 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBE2F-220ENST00000472479 COX16Q9P0S2 106 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 DNMT3BQ9UBC3 853 aaKnown RBP11.03□□□□□ -0.64
UBE2F-220ENST00000472479 GUCA1BQ9UMX6 200 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 PPP2R2CQ9Y2T4 447 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 USP3Q9Y6I4 520 aa11.03□□□□□ -0.64
UBE2F-220ENST00000472479 RANBP2P49792 3224 aaKnown RBP11.02□□□□□ -0.64
UBE2F-220ENST00000472479 MACROD2A1Z1Q3 448 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 SIGLEC16A6NMB1 481 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 BUB1O43683 1085 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 HMGA1P17096 107 aaKnown RBP11.02□□□□□ -0.65
UBE2F-220ENST00000472479 GJA1P17302 382 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 GPD1P21695 349 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 KCNA5P22460 613 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 GBP1P32455 592 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 RPL34P49207 117 aaKnown RBP11.02□□□□□ -0.65
UBE2F-220ENST00000472479 ITIH3Q06033 890 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 PTP4A2Q12974 167 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 TAF5Q15542 800 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 ZFYVE27Q5T4F4 411 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 GPR158Q5T848 1215 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 OLFML1Q6UWY5 402 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 SND1Q7KZF4 910 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBE2F-220ENST00000472479 GPR149Q86SP6 731 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 CMASQ8NFW8 434 aaPredicted RBP11.02□□□□□ -0.65
UBE2F-220ENST00000472479 SLC35G2Q8TBE7 412 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 ZNF564Q8TBZ8 553 aaPredicted RBP11.02□□□□□ -0.65
UBE2F-220ENST00000472479 OVCA2Q8WZ82 227 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 ARHGEF26Q96DR7 871 aa11.02□□□□□ -0.65
UBE2F-220ENST00000472479 TRMT2BQ96GJ1 504 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms