RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 LRRTM3Q86VH5 581 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 DDX42Q86XP3 938 aaKnown RBP eCLIP12.06□□□□□ -0.48
COMMD2-202ENST00000469896 PHTF2Q8N3S3 785 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 TERB1Q8NA31 727 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 SNX19Q92543 992 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 BRF1Q92994 677 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 ERLEC1Q96DZ1 483 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 TSPAN18Q96SJ8 248 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 GABRG3Q99928 467 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 PCED1AQ9H1Q7 454 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 ABCB6Q9NP58 842 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 CD93Q9NPY3 652 aa12.06□□□□□ -0.48
COMMD2-202ENST00000469896 SPTBN1Q01082 2364 aaKnown RBP12.05□□□□□ -0.48
COMMD2-202ENST00000469896 ANO9A1A5B4 782 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 PAPSS1O43252 624 aaPredicted RBP12.05□□□□□ -0.48
COMMD2-202ENST00000469896 TULP3O75386 442 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 TOM1L1O75674 476 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 CLTAP09496 248 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 GRIA4P48058 902 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 ACADVLP49748 655 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 DNAJC3Q13217 504 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 NPY5RQ15761 445 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 ZBTB6Q15916 424 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 DDR2Q16832 855 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 LY6G5CQ5SRR4 150 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 KIAA1614Q5VZ46 1190 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 EGFLAMQ63HQ2 1017 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 PIK3AP1Q6ZUJ8 805 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 SLC6A17Q9H1V8 727 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 CD248Q9HCU0 757 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 USP36Q9P275 1121 aaKnown RBP12.05□□□□□ -0.48
COMMD2-202ENST00000469896 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
COMMD2-202ENST00000469896 DENND4CQ5VZ89 1909 aa12.05□□□□□ -0.48
COMMD2-202ENST00000469896 TTC26A0AVF1 554 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 H0Y8X5 98 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 K7ENP7 123 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 ABLIM1O14639 778 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 SUV39H1O43463 412 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 MATR3P43243 847 aaKnown RBP eCLIP12.04□□□□□ -0.48
COMMD2-202ENST00000469896 ERVPABLB-1P60509 514 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 SLC7A9P82251 487 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 IL9RQ01113 521 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 STRN3Q13033 797 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 ORC1Q13415 861 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 SAFBQ15424 915 aaKnown RBP eCLIP12.04□□□□□ -0.48
COMMD2-202ENST00000469896 SEZ6Q53EL9 994 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 INO80CQ6PI98 192 aaPredicted RBP12.04□□□□□ -0.48
COMMD2-202ENST00000469896 ADAT2Q7Z6V5 191 aaKnown RBP12.04□□□□□ -0.48
COMMD2-202ENST00000469896 MIB1Q86YT6 1006 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 NAT16Q8N8M0 369 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 C1orf216Q8TAB5 229 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 SCFD1Q8WVM8 642 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 TSC1Q92574 1164 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 OTUB2Q96DC9 234 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 NUP58Q9BVL2 599 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 OSGEPQ9NPF4 335 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 ITM2CQ9NQX7 267 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 CFAP97Q9P2B7 532 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 RAD54BQ9Y620 910 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 ITPR3Q14573 2671 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 CITO14578 2027 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 ANK1P16157 1881 aa12.04□□□□□ -0.48
COMMD2-202ENST00000469896 MYO18AQ92614 2054 aaKnown RBP12.03□□□□□ -0.48
COMMD2-202ENST00000469896 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 GFRA2O00451 464 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 CYB561D2O14569 222 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 SCAMP3O14828 347 aaKnown RBP12.03□□□□□ -0.48
COMMD2-202ENST00000469896 TRIM66O15016 1216 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 CLDN3O15551 220 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 HOXC11O43248 304 aaPredicted RBP12.03□□□□□ -0.48
COMMD2-202ENST00000469896 SPATA31C1P0DKV0 1188 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 SFTPCP11686 197 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 ABCB4P21439 1286 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 TXKP42681 527 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 NPTX2P47972 431 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 TPMTP51580 245 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 GUCY2FP51841 1108 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 PEX3P56589 373 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 ZXDBP98169 803 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 KYAT1Q16773 422 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 ANO4Q32M45 955 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 GRAMD4Q6IC98 578 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 Q6ZUG5 572 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 CATSPER3Q86XQ3 398 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 ETFBKMTQ8IXQ9 262 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 TMEM130Q8N3G9 435 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 DCBLD1Q8N8Z6 715 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 LEO1Q8WVC0 666 aaPredicted RBP12.03□□□□□ -0.48
COMMD2-202ENST00000469896 ACOX2Q99424 681 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 PYM1Q9BRP8 204 aaKnown RBP12.03□□□□□ -0.48
COMMD2-202ENST00000469896 ARHGAP9Q9BRR9 750 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 KMT5AQ9NQR1 393 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 THSD1Q9NS62 852 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 STARD5Q9NSY2 213 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 SMPD4Q9NXE4 827 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 EHD2Q9NZN4 543 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 CPQQ9Y646 472 aa12.03□□□□□ -0.48
COMMD2-202ENST00000469896 FBN2P35556 2912 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms