RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 TADA2BQ86TJ2 420 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 RHOT2Q8IXI1 618 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 MCOLN2Q8IZK6 566 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 EFHBQ8N7U6 833 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 STKLD1Q8NE28 680 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 GPR152Q8TDT2 470 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 RNF139Q8WU17 664 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 VCPIP1Q96JH7 1222 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 UHRF1Q96T88 793 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-216ENST00000468949 SLC4A5Q9BY07 1137 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 ULBP1Q9BZM6 244 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 TLR8Q9NR97 1041 aaKnown RBP8.53□□□□□ -1.04
HDAC6-216ENST00000468949 PARVAQ9NVD7 372 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 COMMD8Q9NX08 183 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 TAS2R14Q9NYV8 317 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 INTUQ9ULD6 942 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 PCDHA13Q9Y5I0 950 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
HDAC6-216ENST00000468949 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 GOLGA6L9A6NEM1 432 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 GRXCR2A6NFK2 248 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 H3BQ06 376 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 HSF2BPO75031 334 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 VNN2O95498 520 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 USP17L7P0C7H9 530 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 TMEM253P0C7T8 217 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 MYL4P12829 197 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 BMP1P13497 986 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 CDC25CP30307 473 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 GALCP54803 685 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 RNASE9P60153 205 aaKnown RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 ZNF268Q14587 947 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 CTC1Q2NKJ3 1217 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 ASTE1Q2TB18 679 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 PABPC1LQ4VXU2 614 aaKnown RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 ARHGAP15Q53QZ3 475 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 C2CD6Q53TS8 623 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 EFHC1Q5JVL4 640 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 RARS2Q5T160 578 aaKnown RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 BTBD8Q5XKL5 378 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 CES5AQ6NT32 575 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 LILRA6Q6PI73 481 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 GPRIN1Q7Z2K8 1008 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 PHLDB2Q86SQ0 1253 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 TMEM110Q86TL2 294 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 XYLT1Q86Y38 959 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 LEMD2Q8NC56 503 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 C3orf20Q8ND61 904 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 ZMIZ2Q8NF64 920 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 SLC22A17Q8WUG5 538 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 RFFLQ8WZ73 363 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 OVCA2Q8WZ82 227 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 IRGQQ8WZA9 623 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 SMG7Q92540 1137 aaKnown RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 MRPS31Q92665 395 aaKnown RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 PSMG2Q969U7 264 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 MCEEQ96PE7 176 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 ALS2CR12Q96Q35 445 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 CDK5RAP1Q96SZ6 601 aaKnown RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 CORO1BQ9BR76 489 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 NUP85Q9BW27 656 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 THAP2Q9H0W7 228 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 ISCUQ9H1K1 167 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 CRISPLD1Q9H336 500 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 KCNF1Q9H3M0 494 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 SLITRK6Q9H5Y7 841 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 METTL5Q9NRN9 209 aaKnown RBP8.52□□□□□ -1.05
HDAC6-216ENST00000468949 TRPM5Q9NZQ8 1165 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 CYTH4Q9UIA0 394 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 LCMT1Q9UIC8 334 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 STAP1Q9ULZ2 295 aa8.52□□□□□ -1.05
HDAC6-216ENST00000468949 CCDC195A0A1B0GUA6 201 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 HHLA1C9JL84 531 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 ZNF197O14709 1029 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 PAPSS1O43252 624 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 RFPL2O75678 378 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 LCA5LO95447 670 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 LTFP02788 710 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 GLI1P08151 1106 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 KRT3P12035 628 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 NCAM1P13591 858 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 HOXB8P17481 243 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 RRM1P23921 792 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 MSNP26038 577 aaKnown RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 SCNN1AP37088 669 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 GABRB2P47870 512 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 PPP3CCP48454 512 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 GSCP56915 257 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 DAOAP59103 153 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 YWHAGP61981 247 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 SLC6A3Q01959 620 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 TAF10Q12962 218 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 SMAD4Q13485 552 aaKnown RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 MTMR3Q13615 1198 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 RAB41Q5JT25 222 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 OLFML1Q6UWY5 402 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 TMC5Q6UXY8 1006 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms