RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 GRIA2P42262 883 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 CXCL12P48061 93 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 GNAQP50148 359 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 CLCN3P51790 818 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF445P59923 1031 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 TRDNQ13061 729 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 NMIQ13287 307 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 ITGB3BPQ13352 177 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 HSP90AA2PQ14568 343 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 SART3Q15020 963 aaKnown RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 TCEA2Q15560 299 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 SLC14A2Q15849 920 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 LPAL2Q16609 132 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 ZFYVE27Q5T4F4 411 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 RNF187Q5TA31 235 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 STPG1Q5TH74 334 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 TWF2Q6IBS0 349 aaKnown RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 EFCAB12Q6NXP0 572 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 KRBA2Q6ZNG9 492 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 FILIP1Q7Z7B0 1213 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 CATIPQ7Z7H3 387 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 CCDC60Q8IWA6 550 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 SPEM1Q8N4L4 309 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 BVESQ8NE79 360 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 MZB1Q8WU39 189 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 PMM1Q92871 262 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 FGF13Q92913 245 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 BRF1Q92994 677 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 AARSD1Q9BTE6 412 aaKnown RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 GCOM2Q9BZD3 368 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 AGO4Q9HCK5 861 aaKnown RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 UBN1Q9NPG3 1134 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 TBC1D22BQ9NU19 505 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 GDE1Q9NZC3 331 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 PCDHA6Q9UN73 950 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 PCDHA8Q9Y5H6 950 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 SMG1Q96Q15 3661 aaKnown RBP6.04□□□□□ -1.44
PTCD3-207ENST00000467273 TRAV20A0A0B4J274 112 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 CCDC163A0A0D9SF12 145 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 NOTOA8MTQ0 251 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 TGM5O43548 720 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 SH3BP5O60239 455 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 AKAP3O75969 853 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 CCNE2O96020 404 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 CEACAM1P13688 526 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 CD72P21854 359 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 RPL10P27635 214 aaKnown RBP6.04□□□□□ -1.44
PTCD3-207ENST00000467273 CDR1P51861 262 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 PDE1AP54750 535 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 RTP5Q14D33 572 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 CLEC16AQ2KHT3 1053 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 USP41Q3LFD5 358 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 LIN9Q5TKA1 542 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 SWSAP1Q6NVH7 229 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 MRPL10Q7Z7H8 261 aaKnown RBP6.04□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF410Q86VK4 478 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 FAM129CQ86XR2 697 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF280BQ86YH2 543 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 TMEFF1Q8IYR6 380 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 CNNM3Q8NE01 707 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 ELSPBP1Q96BH3 223 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 MRGPRX3Q96LB0 322 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 PWWP2AQ96N64 755 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 SCLT1Q96NL6 688 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 CDC6Q99741 560 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 RPP25Q9BUL9 199 aaKnown RBP6.04□□□□□ -1.44
PTCD3-207ENST00000467273 GLT8D2Q9H1C3 349 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 RSAD1Q9HA92 442 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 TCEAL9Q9UHQ7 104 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 PCDHA10Q9Y5I2 948 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 RPS6KL1Q9Y6S9 549 aa6.04□□□□□ -1.44
PTCD3-207ENST00000467273 SHISA3A0PJX4 238 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 SHISA7A6NL88 538 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 HIP1O00291 1037 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 IPO5O00410 1097 aaKnown RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 B4GALT3O60512 393 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 DDHD2O94830 711 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 EPN2O95208 641 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 CAPNS1P04632 268 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 CSRP1P21291 193 aaKnown RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 SREBF1P36956 1147 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 DNM2P50570 870 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 DSC1Q08554 894 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 LRRC32Q14392 662 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 ZC3H12BQ5HYM0 836 aaKnown RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 DAB2IPQ5VWQ8 1189 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 PDXDC1Q6P996 788 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 CEP128Q6ZU80 1094 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 CEP68Q76N32 757 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 TMC3Q7Z5M5 1100 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 GRASPQ7Z6J2 395 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 WDR5BQ86VZ2 330 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 ARHGEF39Q8N4T4 335 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 LINC01356Q8N9X3 169 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 CTCFLQ8NI51 663 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 OTUD7AQ8TE49 926 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 ZCCHC14Q8WYQ9 949 aaKnown RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 LPPQ93052 612 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 KISS1RQ969F8 398 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms